Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-34 seq109 114 2e-19 seq35 98.7 1e-14 seq2 93.3 5e-13 >seq1 Length=2640167 Score = 165 bits (182), Expect = 1e-34 Identities = 153/194 (79%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| ||| ||| ||| ||| |||||| |||||||||||||||| |||||||||| Sbjct 596172 GCCTTGGAGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATC 596231 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | || ||||||| || |||||| ||| ||| ||||||| || Sbjct 596232 ATGTCCATGAAGTCAAAGGGGTTGGTCGCGTTGTAGACCTTCTCGTCACCGAGCGCGACG 596291 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| ||||||||||| ||||||||||| ||||||||||| | ||||||||| ||| Sbjct 596292 AGCAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTCGAGTTCATGCCAATG 596351 Query 868871 AGCGCCACCGGCAG 868884 ||||| || ||||| Sbjct 596352 AGCGCGACGGGCAG 596365 Score = 140 bits (154), Expect = 4e-27 Identities = 183/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| || || || Sbjct 596823 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGC 596882 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || |||| || || | ||||| ||| || || |||||| |||||||| Sbjct 596883 ACCTCGTTGCTGAAACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAG 596942 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CG--ACACCCAGTGG 869809 || || ||||| ||| ||| |||| ||||||| |||| |||| || ||||| | Sbjct 596943 AAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCG 597002 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | |||||||| |||||| |||||||||| ||||||||||||||| ||| Sbjct 597003 TGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCCTCGGCCTTCTTG 597062 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 597063 TACATTTGCCA 597073 Score = 127 bits (140), Expect = 2e-23 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 868708 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 868767 ||| ||| |||||||||||| |||||||||| ||| || ||||| ||||| | ||| Sbjct 599690 CACTCGCTTCTCGAAAAAGTTTGTCTTGCCCTGGAGTGATATCAAGTCCATGAAGTCGAA 599631 Query 868768 CGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGAC 868827 ||| || | || ||||||||||| ||| || || || | | || || || ||||| Sbjct 599630 CGGATTCGTCGCGTTGTAGTGCTTCTCGTTGCCTAGGGAGACCAAGAGCCGATCTGCGAC 599571 Query 868828 AAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAG 868872 ||||||||||||||||| ||| || | |||||||| |||||||| Sbjct 599570 AAACTCGATGTACTGGCGCATCAGAGCAGCGTTCATACCGATGAG 599526 Score = 113 bits (124), Expect = 6e-19 Identities = 189/263 (72%), Gaps = 19/263 (7%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGA-TGGCGCAGAAACTGCC 869268 |||| ||||||||||||||| || |||||||||||||| || | || |||| ||||| || Sbjct 599312 AAGGTGAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCA-AAACTTCC 599254 Query 869269 CGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAG 869328 |||||| || || || ||||| || ||||| ||| |||| ||| | || || || Sbjct 599253 CGAGAAGAATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAA--TGATGA- 599197 Query 869329 GCCCTC-CTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCA 869384 || ||||| |||||| || |||||||||||||| ||| | | |||| | Sbjct 599196 ----TCGCTTGTCTGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGA 599141 Query 869385 CCGTGTCGATGGCG-CGAA-AG-AGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGT 869441 || || || ||| |||| || | | | || || |||||||||| ||||||| Sbjct 599140 TGGTCTCTATCGCGTCGAACAGAAACTCGCGCTCTT---GAGGGTCCTTGATGTAGGTGT 599084 Query 869442 CGATCAGGAGCGAATAGGTCTCC 869464 | || ||||| ||||| |||||| Sbjct 599083 CAATTAGGAGGGAATATGTCTCC 599061 Score = 111 bits (122), Expect = 2e-18 Identities = 200/288 (69%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| | ||||| | ||||| |||| ||| ||||||||||| || |||||| Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| ||||||| ||| ||| || ||||| ||||| |||||||||||||| || Sbjct 596601 TTGAGCCAGAAGATGGACGC-GAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAA 596659 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 ||| || ||||| || |||| || | ||||| |||||| | || Sbjct 596660 CGCGACAAGGCGCTCAGCGAAGG----AAG--ATTTCTTGTCAGAGATCCAGCGGAGGGC 596713 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 ||| |||||||| ||| | | | || | || ||||||||| || ||||| || Sbjct 596714 CCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCG 596773 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||||| |||| || ||||| || || || || || ||||| Sbjct 596774 CTGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTC 596821 >seq109 Length=2399336 Score = 114 bits (126), Expect = 2e-19 Identities = 149/202 (74%), Gaps = 12/202 (6%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||| |||||||||||||| |||||||| |||| | || Sbjct 1332593 GCTTGGCGAGCTCACCAGGGAGGATGAGGCGCACGGCGGTTTGGATCTCACGCGAGGAGA 1332534 Query 1254403 TCGTGTTGCG-CTTGTTCGAGTG---CGCCAGA--CGGCCGGCCTCGGTGCCGATGCGGT 1254456 |||| || ||| ||||||| ||| || || | ||||||||| | ||||| | Sbjct 1332533 TCGT----CGACTTCTTCGAGTATGACGCAAGCTTCGAC--GCCTCGGTGGCAATGCGCT 1332480 Query 1254457 CGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGT 1254516 ||| || ||||| || |||||||| | || | ||||| |||||| ||||| || || Sbjct 1332479 CGAAAATATCGTTCACGAACGAGTTGAGGATGGCCATCGCCTTGTTCGAGATACCAGTGT 1332420 Query 1254517 CGGGGTGCACCTGCTTGAGCAC 1254538 | ||||| ||||||||||| || Sbjct 1332419 CAGGGTGGACCTGCTTGAGGAC 1332398 >seq35 Length=923662 Score = 98.7 bits (108), Expect = 1e-14 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 ||||||| ||||| ||||||||||| || || ||||||||| || || ||||| || Sbjct 866632 TCCACAGCGCGTAGAAGAGGTCGCGGGCACGAACCTCCTCCTTACCATGATTCTTACGGA 866691 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 |||||| |||||| || ||||||||||| ||||| |||||| ||| || || ||| Sbjct 866692 GGTCGATGAAGTCGAAGATATCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCG 866751 Query 1628585 TGCGCTT 1628591 ||||| Sbjct 866752 GACGCTT 866758 Score = 89.7 bits (98), Expect = 6e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 1628127 AAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGATCTCGGTGCACAGGTT 1628186 |||||||||| || ||| ||| || || ||| || |||||| ||||||||||| Sbjct 866242 AAGGTTGCAAACAGCGGTCTCCTCGGGTGAAGAGTACTCGATGATCTCCGTGCACAGGTT 866301 Query 1628187 GGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTG 1628246 | |||| | | || || |||||||||||||| | || ||| | | ||||||| Sbjct 866302 TGACGACTTGATGGTGCCGAGGTTCTGCTGGTTAGACTTCGCATTGGCAGAATCCTTGTA 866361 Query 1628247 GAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 ||||||| |||| | || |||||||| |||||| Sbjct 866362 GAGCATGAAGGGTCCACCAGTCTCGATTTGCGCC 866395 Score = 86.0 bits (94), Expect = 8e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 |||||||||||||||||||||||| | || ||||| | || || || ||||||||||| Sbjct 865272 CTGGTCGACGGTAAACTGGATGGCCTGCGCCGCGGGGCGTGTACGGAGGTAGTACATGCC 865331 Query 1627041 GGTCTTGAGGCC 1627052 |||||||||||| Sbjct 865332 GGTCTTGAGGCC 865343 Score = 86.0 bits (94), Expect = 8e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 ||||| || || || | ||| || | |||||| | || || || ||||| |||||| Sbjct 866939 CCGATACCACCAGCGGTCTTACTAATCATCGCGCAGTTCTTCAGGGTATCGTAAATGCCC 866998 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 |||||||| ||| |||||||| || || ||||| || | ||||||| | || Sbjct 866999 TCGATCGAATCGTCCTTCATGCAGACCAGGAAGCATGAGCTGAGCTGCGGGTTGGGTGTA 867058 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 || |||||||||||||| |||| || ||||| || || |||||| || |||| Sbjct 867059 CCCGCGTTGAAGAGCGTTGGCGAAGCATGTGTGAAGAATCGCTCGGACATGAGGTTGTAG 867118 Query 1630363 GTGGCGA--GCACG 1630374 || ||| ||||| Sbjct 867119 GTCTCGATCGCACG 867132 >seq2 Length=982895 Score = 93.3 bits (102), Expect = 5e-13 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GT 19110 ||| ||||| || || || ||||| ||| ||| ||||| || || |||||||| || Sbjct 483812 CATTGGCGGAACTGTCACCTGCGTCATTCGTGGCGTACCGGCTGGACTTGGCGAGCCTGT 483753 Query 19111 GCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170 | || |||||| ||||||| ||||||||| || ||||| || || || || || |||| Sbjct 483752 G-TTCGACAAGCTCGAGGCAAAGCTCGCCCATGCGATGCTTTCAATTCCCGCGACAAAGG 483694 Query 19171 GATTCGAGATTGG 19183 | ||||||||||| Sbjct 483693 GTTTCGAGATTGG 483681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107124920745158