Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq120 116 3e-21 seq98 116 3e-21 >seq120 Length=2004100 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || |||||||| || ||| | || Sbjct 1879662 ATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAATCTTCC 1879603 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||| || || Sbjct 1879602 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 1879543 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||||| ||||| | | |||| ||||| ||| Sbjct 1879542 CAGCGTCTCATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACGTTGTCCGATTACAAC 1879483 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||||| || || ||| Sbjct 1879482 ATTCAGAAGGAATCCACTCTCCAC 1879459 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || ||||| ||||| || || ||||| ||||| || || | || Sbjct 1878874 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATTACCCTCGAGGTTGAGTCTTCC 1878815 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| ||||| || || ||||| || Sbjct 1878814 GACACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAG 1878755 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || || || ||||| | | | | | || || || ||| Sbjct 1878754 CAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGGCGTACCCTCTCCGACTACAAC 1878695 Query 24884 ATTCAAAAGGA 24894 || || ||||| Sbjct 1878694 ATCCAGAAGGA 1878684 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || ||||| || || || | Sbjct 1879942 ATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 1879883 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1879882 GACACTATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAG 1879823 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| |||||| | | | | || ||||| ||| Sbjct 1879822 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAAC 1879763 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || ||||| || || || || ||||||| Sbjct 1879762 ATCCAGAAGGAGTCCACCCTCCACCTTGGTG 1879732 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || || || || || || || | | Sbjct 1879384 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTCGAGTCGTCG 1879325 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| || || || ||||| ||||| Sbjct 1879324 GACACAATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGATCAG 1879265 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| || ||| | | | || ||||| || Sbjct 1879264 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACGCTTTCGGATTACAAT 1879205 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 1879204 ATTCAGAAGGAGTCTACCCTCCAC 1879181 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| || || || |||||||| || || | | Sbjct 1879156 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 1879097 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| || || || || || || || Sbjct 1879096 GATACCATTGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 1879037 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| ||||| || || ||||||||||| | | | || || || ||| Sbjct 1879036 CAGCGCCTGAT-TTTGCTGGTAAGCAGCTGGAGGACGGTCGCACTCTTTCGGACTACAAC 1878978 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 1878977 ATTCAGAAGGAGTCTACCCTTCAC 1878954 >seq98 Length=2497588 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || |||||||| || || || | || Sbjct 2388256 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCC 2388315 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || |||||| Sbjct 2388316 GACACTATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCAA 2388375 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| ||||| | | | |||| ||||| ||| Sbjct 2388376 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAAC 2388435 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || | || | ||||| || Sbjct 2388436 ATCCAGAAGGAGTCGACGCTCCACCTTGTCCTCCGCCTCCGCGGCGG 2388482 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || ||||| || | | Sbjct 2387747 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAAGTCGAGTCATCG 2387806 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 2387807 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 2387866 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| || || || ||||| |||||| | | | || || |||||| Sbjct 2387867 CAACGCCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAAC 2387926 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 || || ||||| || || || || |||||| Sbjct 2387927 ATCCAGAAGGAGTCTACTCTTCACCTTGGT 2387956 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || || || ||||||||||| ||||| Sbjct 2388568 AAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGGTTGATCTTTGCGGGGAAG 2388627 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 || || |||||| | | | | | ||||| |||||||| || ||||| || || || || Sbjct 2388628 CAACTTGAGGATGGGCGTACCCTTTCAGACTATAACATCCAGAAGGAGTCCACGCTCCA 2388686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896621472720