Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2 145 6e-30 >seq2 Length=982895 Score = 145 bits (160), Expect = 6e-30 Identities = 258/369 (70%), Gaps = 13/369 (4%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTA-GC--GTGCCGTGA 34260 || ||||| ||||| ||||||||| ||||||| || | || | || |||| | Sbjct 642823 GGAGGGTTCTTCAGAATGAAGGTGGTGAGCTTGTGTCTCATGTCGACGCCAGTGC---GC 642879 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGT--TCTTTTTAGCGGACACGATGAGCT 34318 | ||||| ||||||||| | || ||| || | || | | || | | |||||| | Sbjct 642880 TCGCCGCAGGCTTTGCAGTC---ACGGATGATCTCATCCTGCTT-CGTA-ATGATGAGGT 642934 Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 | ||||| ||||| | || | || | ||||||||| |||||| || || || | Sbjct 642935 CCGTCTCAGGGTTCTTGCACGACTTGCAGAGGACAAACTTGTCGATGAACCCGTCGAGGA 642994 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 | || | | ||| | |||||| | |||||||| ||| | || ||||| || | | Sbjct 642995 GCTCGCGCAGCTTGGTCGCGTCGTGAGCACCGTTGACAATGTAACGGTCGTTCTTCTCGT 643054 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 ||| ||| |||||||| |||||||| ||||||||||| || ||||| ||| |||| Sbjct 643055 CGAAAGACGTCTGCGCGCCGAGCTCGCAGCCGAAGTACTTGGTGGGGTACGTGGGAGGAC 643114 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | |||||| ||||| |||| ||||||| ||||| |||||||| |||||||| | Sbjct 643115 GGGACAGCGCCCGGGCGACGTCGGACATGTTGGGAATGACGGTCTTGATACCGTTGCCTT 643174 Query 34559 TTCCTTCGA 34567 | || |||| Sbjct 643175 TGCCCTCGA 643183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840724517782