Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-33 seq109 138 2e-26 seq98 102 1e-15 seq87 89.7 8e-12 seq35 87.8 3e-11 >seq1 Length=2640167 Score = 161 bits (178), Expect = 2e-33 Identities = 235/330 (71%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| | ||||| | ||||| ||| ||| ||||||||||| || |||||| Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||| || ||||| ||||| |||||||||||||| || Sbjct 596601 TTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAC 596660 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGCC 794517 |||| || ||||| || || | | | |||| || |||||| | ||| Sbjct 596661 GCGACAAGGCGCTCAGCGAAGG-----AAGATTTCTT-GTCAGAGATCCAGCGGAGGGCC 596714 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || ||||| ||| | | |||| | || ||||||||| || ||||| || | Sbjct 596715 CAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGC 596774 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 | |||||| |||| ||| ||||| ||||| || ||||| ||||| ||||||||||| Sbjct 596775 TGCTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTC 596834 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || |||||||||||| || |||||| Sbjct 596835 TCCATCATGATCTGGAAGCCGTAGAAGCAG 596864 Score = 158 bits (174), Expect = 2e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||||| || ||| ||| ||| |||||| |||||||||||||||| || Sbjct 596164 TGACACCAGCCTTGGAGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGA 596223 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||||| ||||| | || ||||||| || |||| ||||||| |||| Sbjct 596224 GCGAGATCATGTCCATGAAGTCAAAGGGGTTGGTCGCGTTGTAGACCTTCTCGTCACCGA 596283 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | ||||| |||||||||||||| || ||||| ||||||||||| | ||||| Sbjct 596284 GCGCGACGAGCAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTCGAGTTCA 596343 Query 794071 TGCCGATGAGCGCCACGGGCAG 794092 |||| |||||||| |||||||| Sbjct 596344 TGCCAATGAGCGCGACGGGCAG 596365 Score = 123 bits (136), Expect = 4e-22 Identities = 209/294 (71%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGA-TGGCACAGAAACTGCCCGAGA 794434 ||||||||||||||| || |||||||||||||| || | || | || ||||| ||||||| Sbjct 599307 GAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCA-AAACTTCCCGAGA 599249 Query 794435 AAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCT 794494 | || || || ||||| || ||||| |||| |||| ||| | || || | | | Sbjct 599248 AGAATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAA--TGATGATCGCTT 599191 Query 794495 CTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGA 794554 | || |||||| || ||||| || ||||| ||| | | | || | || || | Sbjct 599190 GTCTG-AGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTA 599132 Query 794555 TGGCG-CGAA-AGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 | ||| |||| ||| | ||| || |||||||||| ||||||||| || ||||| Sbjct 599131 TCGCGTCGAACAGAAACTCGCGCTCTTGA--GGGTCCTTGATGTAGGTGTCAATTAGGAG 599074 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||| || || ||||| || || ||||||||||| || ||||| Sbjct 599073 GGAATATGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCA 599020 Score = 116 bits (128), Expect = 6e-20 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 793898 CGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 793957 |||||| ||| || ||| ||| |||||||||||| |||||||||| ||| || || Sbjct 599708 CGCCTTCTGATAGTCCGACACTCGCTTCTCGAAAAAGTTTGTCTTGCCCTGGAGTGATAT 599649 Query 793958 CAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGC 794017 ||| ||||| | |||||| || | || ||||||||||||| || || || | Sbjct 599648 CAAGTCCATGAAGTCGAACGGATTCGTCGCGTTGTAGTGCTTCTCGTTGCCTAGGGAGAC 599589 Query 794018 AAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 | || || || ||||| || || |||||||||| ||| || || |||||||| ||||| Sbjct 599588 CAAGAGCCGATCTGCGACAAACTCGATGTACTGGCGCATCAGAGCAGCGTTCATACCGAT 599529 Query 794078 GAGCGCCACGGGCAGCG 794094 ||| | |||| |||| Sbjct 599528 GAGATCGACGGATAGCG 599512 Score = 86.0 bits (94), Expect = 1e-10 Identities = 140/201 (70%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 796162 TGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCG 796221 || ||||| || |||||| | | |||||||| || ||||||||| |||||| Sbjct 599003 TGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCG 598944 Query 796222 AAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAGAC---CCAG 796278 || || || |||||||| ||| || | |||||||| | | |||| | | |||| Sbjct 598943 AAGAATGCAAGGACGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTCCAG 598884 Query 796279 TGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTT 796338 | | ||| || ||||| | ||| || || ||||| || |||||||| || ||| Sbjct 598883 TCCATGAGGTCATGCCCCAGGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCTTTT 598824 Query 796339 TTGTACATCTCCCATATCCGT 796359 |||||||||| ||| ||| || Sbjct 598823 TTGTACATCTGCCAGATCTGT 598803 >seq109 Length=2399336 Score = 138 bits (152), Expect = 2e-26 Identities = 175/235 (74%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 1485476 TGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCA 1485535 |||| |||| |||||| ||||| |||| ||||||| |||| || || || | | ||| | Sbjct 1332626 TGGTAACGGACTTGGTGCCCTCAGAGATGGCGTGCTTGGCGAGCTCACCAGGGAGGATGA 1332567 Query 1485536 GGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG-CTTGTT--AGTGCG-C 1485591 ||||||||||||| |||||||| || | | |||||| || ||| || ||| | | Sbjct 1332566 GGCGCACGGCGGTTTGGATCTCACGCGAGGAGATCGT----CGACTTCTTCGAGTATGAC 1332511 Query 1485592 GCCAG--GCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || || | ||||||||| | ||||| |||| || ||||| || |||||||| | Sbjct 1332510 GCAAGCTTCGAC--GCCTCGGTGGCAATGCGCTCGAAAATATCGTTCACGAACGAGTTGA 1332453 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||||| ||||| ||||| || ||| ||||| ||||||||||| || Sbjct 1332452 GGATGGCCATCGCCTTGTTCGAGATACCAGTGTCAGGGTGGACCTGCTTGAGGAC 1332398 >seq98 Length=2497588 Score = 102 bits (112), Expect = 1e-15 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || |||||||||||||||||| | ||||||| ||||| || ||| || | || | | Sbjct 783899 CTTCCGCCCGGCCGCCACAAGATAGTCATCCTGGATGAAGCTGACAGCATGACACCCGGA 783840 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || ||||| || || || |||||||| | || | ||||| |||||||||||||| Sbjct 783839 GCACAGCAAGCACTGCGGAGAACCATGGAGATTTATTCGAACACCACGCGGTTTGCGCTA 783780 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373 || || |||| ||| | | |||| || || | || ||||||||||| || |||| Sbjct 783779 GCGTGTAACATGTCCAACAAGATCATTGAGCCCATACAAAGCCGTTGCGCTATACTGCG 783721 >seq87 Length=2533944 Score = 89.7 bits (98), Expect = 8e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||| || | |||||| ||||| |||| ||||||| ||||||| || || | | ||| Sbjct 110948 CTTGGTTACCGACTTGGTGCCCTCGGAGATGGCGTGCTTGGCCAGCTCACCCGGAAGGAT 111007 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||||||||||| |||||||||||||| Sbjct 111008 GAGGCGCACGGCAGTCTGGATCTCGCG 111034 >seq35 Length=923662 Score = 87.8 bits (96), Expect = 3e-11 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 2071552 GCTGTCTCCGTTGGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTG 2071611 || |||||| || || || ||| || || ||| ||||||||||| | |||| | || Sbjct 866255 GCGGTCTCCTCGGGTGAAGAGTACTCGATGATCTCCGTGCACAGGTTTGACGACTTGATG 866314 Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 ||||| |||||||||||||| || ||| | | ||||||| |||||| |||| Sbjct 866315 GTGCCGAGGTTCTGCTGGTTAGACTTCGCATTGGCAGAATCCTTGTAGAGCATGAAGGGT 866374 Query 2071672 GCACCCGTCTCGATCTGCGCC 2071692 |||| |||||||| |||||| Sbjct 866375 CCACCAGTCTCGATTTGCGCC 866395 Score = 86.0 bits (94), Expect = 1e-10 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 ||||||| |||| ||||| ||||| || || ||||||||| || || ||||| | Sbjct 866632 TCCACAGCGCGTAGAAGAGGTCGCGGGCACGAACCTCCTCCTTACCATGATTCTTACGGA 866691 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 |||||| |||||| || ||||||||||| ||||| |||||| ||| || || ||| Sbjct 866692 GGTCGATGAAGTCGAAGATATCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCG 866751 Query 2071997 TGCGCTT 2072003 ||||| Sbjct 866752 GACGCTT 866758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916227890826386