Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq120 145 5e-30 seq98 123 2e-23 seq79 93.3 3e-14 >seq120 Length=2004100 Score = 145 bits (160), Expect = 5e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||||||||||||| ||||| ||||| || ||| | ||| | || Sbjct 1878663 AGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCC 1878722 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| |||||||||||||| || |||||||| |||| | || |||||||| Sbjct 1878723 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCT 1878782 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | |||| || | ||| || || | ||| || ||| Sbjct 1878783 TGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTC 1878842 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| |||||||| |||||| Sbjct 1878843 TTGCCGGTGAGCGTCTTGACAAAGATTTGCATG 1878875 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||||||||| || || ||||| || |||| |||| Sbjct 1879173 AGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCT 1879232 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 1879233 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 1879292 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| |||| ||| || ||| Sbjct 1879293 TGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTC 1879352 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || ||||||||||| Sbjct 1879353 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 134 bits (148), Expect = 9e-27 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||| ||||| || || || ||| |||| |||| || || Sbjct 1879737 AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGC 1879796 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||| ||||| || || ||||||||| | || | ||||||||||| | || Sbjct 1879797 TGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATC 1879856 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | ||| || |||||| || | ||| |||||||| ||| Sbjct 1879857 TTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCC 1879916 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| || || ||||||||| Sbjct 1879917 GTGAGAGTCTTCACGAATATCTGCATG 1879943 Score = 107 bits (118), Expect = 1e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||||||||| |||||||| || |||| | || ||||| Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || || ||||| || ||||||||| | || | ||||||||||| | || Sbjct 1879012 TGCTTACCAGC-AAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | |||||| || | || || ||||| || Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || ||||| ||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || ||||||||| ||||||||||| || || |||| |||| || || Sbjct 2387952 AGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2387893 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || ||||| |||||| | || | || |||||||| | || Sbjct 2387892 TGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 2387833 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || | |||||| |||| ||| || ||||| ||| Sbjct 2387832 TTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCC 2387773 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| || ||||||||||| Sbjct 2387772 GTGAGGGTCTTGACGAAGATCTGCAT 2387747 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||| ||||| ||||| |||||| |||| | || Sbjct 2388239 AGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCC 2388180 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || ||||| || ||| |||| | |||||||| || Sbjct 2388179 TCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCC 2388120 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | |||||| || | ||| |||||| Sbjct 2388119 TGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTC 2388060 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| ||||||||||||||| Sbjct 2388059 TTGCCGGTAAGTGTCTTGACAAAGATCTGCATG 2388027 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||||||||| || ||| | ||| |||| || |||||||| || || || Sbjct 2388675 CTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCCTCAAGTTGCTTCCCCGCAAA 2388616 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||||||| | || | ||||||||||| | || || ||||| Sbjct 2388615 GATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTCGCCTTGACATT 2388556 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | ||| || || | || |||||||||||||| | ||||| || Sbjct 2388555 GTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTCAC 2388496 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 2388495 GAAAATTTGCAT 2388484 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| || ||||| ||| |||| | || Sbjct 2388467 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCC 2388408 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || || || || | || | ||||||||||| Sbjct 2388407 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCC 2388348 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| || | || |||||| Sbjct 2388347 TGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTC 2388288 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 2388287 TTGCCGGTAAGGGTCTTGACAAAGATCTGCATG 2388255 >seq79 Length=745021 Score = 93.3 bits (102), Expect = 3e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 401242 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 401301 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || ||||| |||||||||||||||||||| |||||| Sbjct 401302 TCGAGCTGCTTGCCGGCGAAGATCAGTCGTTGTTGGTCT 401340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692109327706