Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq98 109 4e-19 seq120 91.5 1e-13 >seq98 Length=2497588 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | ||| |||||||| || || || |||||||| || | || ||| || | Sbjct 2388698 CGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCA 2388639 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| || || ||| | ||||| | ||||| || || ||||||||||| ||| Sbjct 2388638 TCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTG 2388579 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | || |||||| || || || ||||| || Sbjct 2388578 TCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATG 2388519 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || || ||||| Sbjct 2388518 GTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 >seq120 Length=2004100 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 29576 GCACCAAA-TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| || || ||||| || || || ||||| ||||| | | |||||| ||| Sbjct 1879731 GCACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCC 1879790 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || ||||| ||| | || | | ||||| || || ||||| ||||| ||||| Sbjct 1879791 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC 1879850 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||||||| || || || || || || || Sbjct 1879851 TGGATCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTC 1879910 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | || || || ||||||||||| Sbjct 1879911 TTGCCCGTGAGAGTCTTCACGAATATCTGCAT 1879942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218383094534