Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq98 134 3e-26 seq120 122 2e-22 >seq98 Length=2497588 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| ||||| | || || || || || ||||| || || || || ||| Sbjct 2388254 CCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAT 2388195 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || | || || ||||| ||||| || | |||||||||||| || Sbjct 2388194 AGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGG 2388135 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || |||||||| || ||||| || || || || ||||||||||| | || || Sbjct 2388134 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACC 2388075 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || |||||||| || | ||||| ||||| |||||||| Sbjct 2388074 TCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| |||||||| || ||||| || ||||| || || ||| | | || || || || || Sbjct 2387950 GTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTG 2387891 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || || || ||||| || | |||||| ||||| || || |||||||| ||||| ||||| Sbjct 2387890 CTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 2387831 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || ||||| || || | || ||||| | || ||||||||||| || Sbjct 2387830 CGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGT 2387771 Query 82787 CAACGTCTTTACAAATATCTGCATT 82811 | ||||| || || ||||||||| Sbjct 2387770 GAGGGTCTTGACGAAGATCTGCATT 2387746 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| || ||||| || || || | | || || || ||||| Sbjct 2388686 TGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCCTCAAGTTGC 2388627 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | | || || ||||| || || || ||||| || || ||||| Sbjct 2388626 TTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTC 2388567 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || ||||||||| || || || |||| ||| || ||||| || ||| Sbjct 2388566 GCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTCTTTCCCGTC 2388507 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 |||||||| || || || ||||| Sbjct 2388506 AACGTCTTCACGAAAATTTGCAT 2388484 >seq120 Length=2004100 Score = 122 bits (134), Expect = 2e-22 Identities = 150/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || ||||| || ||||| || || || || || ||| | | |||||| || || || Sbjct 1878954 GTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTG 1879013 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| || || | || || ||||| || || || ||||| ||||| ||||| Sbjct 1879014 CTTACCAGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 1879072 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || ||||| ||||| || || || || | || ||||||||||| || Sbjct 1879073 CGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 1879132 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 || |||||| || || || ||||| Sbjct 1879133 CAGCGTCTTCACGAAGATTTGCAT 1879156 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || ||||| || ||||| ||||| ||||| | Sbjct 1879156 TACCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCG 1879215 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| || || || || || ||||| || | || |||||||||| Sbjct 1879216 AAAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAG 1879275 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| || || || || || || || || | || | Sbjct 1879276 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGA 1879335 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || |||||||| || || | ||||| || || |||||||| Sbjct 1879336 CCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || || || || | | ||||| || ||||| || || || ||| Sbjct 1878684 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAG 1878743 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || || | || || || || || || |||||||| ||||| |||||||| || || || Sbjct 1878744 ATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTG 1878803 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 || ||||| || || || || || | || ||||||||||| || | |||||| ||| Sbjct 1878804 TCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACA 1878863 Query 82800 AATATCTGCAT 82810 || || ||||| Sbjct 1878864 AAGATTTGCAT 1878874 Score = 93.3 bits (102), Expect = 8e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || || || || ||||| || || ||||| || || | | || || || || || Sbjct 1879739 GTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTG 1879798 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || || |||||||| || | || || ||||| || || || ||||| || || ||||| Sbjct 1879799 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTT 1879858 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || || || ||| | || || || | || || |||||||| || Sbjct 1879859 GGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1879918 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| Sbjct 1879919 GAGAGTCTTCACGAATATCTGCAT 1879942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825011138986