Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq120 143 3e-29 seq35 116 4e-21 seq98 111 2e-19 seq1 98.7 1e-15 >seq120 Length=2004100 Score = 143 bits (158), Expect = 3e-29 Identities = 153/200 (77%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 ||||| || ||||| || ||||||||| || ||| ||| ||||||||||||||||| Sbjct 1879466 GTGGATTCCTTCTGAATGTTGTAATCGGACAACGT--ACGGCCGTCCTCGAGCTGCTTGC 1879523 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || ||||||| ||||||||||| ||||| |||||||||||||| |||||| || Sbjct 1879524 CAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 1879583 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | || || |||| |||| ||| ||||| ||||| | Sbjct 1879584 TCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGG 1879643 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 1879644 TCTTGACAAAGATCTGCATG 1879663 Score = 138 bits (152), Expect = 1e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||||||| | ||| | | | ||||| |||||||||| Sbjct 1879745 GGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 1879803 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||||||||| || || ||||| |||||||| |||||| || Sbjct 1879804 CGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 1879863 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | || ||| || |||| ||||| ||| ||||| || |||| Sbjct 1879864 TGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAG 1879923 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 1879924 TCTTCACGAATATCTGCATG 1879943 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| ||| | || | ||||||||| |||||||| ||| | Sbjct 1878683 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAA 1878742 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || || |||||||||||||| ||||||||||||||||| ||||||| ||||| | Sbjct 1878743 GATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTT 1878802 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | |||||||| | ||| || |||| ||| | || |||||||| || || || || Sbjct 1878803 GTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGAC 1878862 Query 133649 GAAAATCTGCATG 133661 || || |||||| Sbjct 1878863 AAAGATTTGCATG 1878875 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| ||||||||||| | |||| | | | || ||||||||||||| Sbjct 1879187 GGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCA-TCTTCGAGCTGCTTGC 1879245 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct 1879246 CGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCT 1879305 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | ||| || || | ||||| || || || || || | Sbjct 1879306 TGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGG 1879365 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 1879366 TCTTGACGAAGATCTGCAT 1879384 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | ||| ||| |||||| |||||||| | Sbjct 1878960 GGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACC-GTCCTCCAGCTGCTTAC 1879018 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || ||||||||||| || || ||||| |||||||| |||||| || Sbjct 1879019 CAGCA-AAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCT 1879077 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | | ||| || |||| |||| || ||||||||||| | Sbjct 1879078 TGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCG 1879137 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 1879138 TCTTCACGAAGATTTGCAT 1879156 >seq35 Length=923662 Score = 116 bits (128), Expect = 4e-21 Identities = 436/670 (65%), Gaps = 14/670 (2%) Strand=Plus/Plus Query 148327 ACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCG 148386 |||| ||| ||| | ||||| ||| | |||||||||||| || | || |||| Sbjct 865737 ACTCATTGAAGCCAAGGATCTGACTGGTAGAAGCCGTGGGCATGGGAGCGAGAAGAAGCG 865796 Query 148387 AGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGC 148445 |||| | | |||| | | || ||||| ||| | |||||||||| || Sbjct 865797 AGTTCCTGAGACCGGTACGCGCCACCTTCGCCTTCA-AGCTGGCCCAGTCCCAAAGATCG 865855 Query 148446 GACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCG 148505 ||||| || || ||| | ||||| || || |||||||| || || |||||| Sbjct 865856 GACGGAGTAACACCCCAGAGATCGTATTGAAGCTGACCGCGGCTCGCCGGAGAACCCTCG 865915 Query 148506 TACGAGCTGTACGGTCCGT-GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTA 148564 || | ||| || |||| ||| | | || | |||| ||||||||||| || | | Sbjct 865916 TAAGTCTCGTAAGGACCGTCGCG-CTCAGCGATGTCGCTGCTCGCCTCGACTGCCGCATG 865974 Query 148565 GTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGG 148621 || || |||||| || ||| |||| ||||| || || |||| ||| |||| Sbjct 865975 ATAGATGGTCTCGAAGATCTGCTTGTTCAGCAG-GC--GCGCCTCGGGAGAGTCGAACGG 866031 Query 148622 CATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681 ||| || || || || || || ||||| || | || || | ||||| || ||||| Sbjct 866032 CATGCGAAGGGCCATGAAGGCATCAGCAAGACCGTTCACACCGATACCAATCGGGCGGTG 866091 Query 148682 TTTAATGTTGGAGAGGCGCGCGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGT 148740 |||||| | | || || ||| || ||| |||| |||| ||| ||||| || Sbjct 866092 GCGCATGTTGCTGCGACGAGC-CTCAGGGATCGGGTAGTAGTTGACGTCAATGATGCGGT 866150 Query 148741 CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT 148800 ||| ||| | || ||||| || || | ||||| || || | ||||||| | | Sbjct 866151 TAAGGTTGTAGGCAACAACCTTCGTGATATCGTGCAGCTTTTGGAAGTTGTACTTGCCGT 866210 Query 148801 CTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGG 148860 ||||| | | | |||||||| || || ||||| || || ||||| || || | Sbjct 866211 TCTCGATGAAGGAGGGGAGAGCGATAGACGCAAGGTTGCAAACAGCGGTCTCCTCGGGTG 866270 Query 148861 CGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTT 148920 |||||| | |||||| | |||||| || | ||||| ||| | ||||| | Sbjct 866271 AAGAGTACTCGATGATCTCCGTGCACAGGTTTGACGACTTGATGGTGCCGAGGTTCTGCT 866330 Query 148921 GATTGCTCTT-GCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACC 148979 | || ||| || | ||| | |||||||| |||||| | ||||| ||||| || | Sbjct 866331 GGTTAGACTTCGCATTGGCA-GAATCCTTGTAGAGCATGAAGGGTCCACCAGTCTCGATT 866389 Query 148980 TGCGTTTCCA 148989 |||| |||| Sbjct 866390 TGCGCCTCCA 866399 Score = 107 bits (118), Expect = 2e-18 Identities = 174/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 147939 GCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAG 147998 || ||||| | || || || ||||||||||| |||||||||||| | ||| ||||| Sbjct 865300 GCCGCGGGGCGTGTACGGAGGTAGTACATGCCGGTCTTGAGGCCCTTCTTCCAACCGTAG 865359 Query 147999 TCGTGCACCGACGACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGG 148058 ||||| || || | | ||||||| | ||| || || || |||| Sbjct 865360 AAGTGCATGCTCGTCAGCTGGCCGATCGTCGGGCTCTGCAGGTGCACGTTCAAGCTCTGG 865419 Query 148059 CTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTC--- 148115 |||||| ||||||||||||||||| ||||| | || ||| ||| ||| | Sbjct 865420 CTCTGGCAGATGAACGCGCCACGGTCTGCGGCGAGGTC---GAGGACCTTCTTCTGCGAG 865476 Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGC 148175 ||||||||| | |||||||| | | |||||| | || |||||||||| ||||| ||| Sbjct 865477 ATCTCCCAGACAGTCTTGTAGATCGCCTTGATCTCGTCAGGAATGCCGTTGATGCTCTGA 865536 Query 148176 ACCGAGCCG 148184 | ||||||| Sbjct 865537 ATCGAGCCG 865545 >seq98 Length=2497588 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || || || ||| | ||| | | | ||||||||||||||||| Sbjct 2387943 GTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCA-TCCTCGAGCTGCTTGCC 2387885 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || |||||||||||||| |||||| ||| Sbjct 2387884 CGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTT 2387825 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||| || || | ||||| || ||||| || || || Sbjct 2387824 CACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGT 2387765 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 2387764 CTTGACGAAGATCTGCAT 2387747 Score = 109 bits (120), Expect = 5e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| || ||| ||| |||||||||||||||||| Sbjct 2388452 GTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACC-GTCCTCGAGCTGCTTGCC 2388394 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||| || || || |||||||| |||||||| ||||| ||| Sbjct 2388393 AGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTT 2388334 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | || | ||| |||||||| || || Sbjct 2388333 GACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTAAGGGT 2388274 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || || ||||||||| || Sbjct 2388273 CTTGACAAAGATCTGCATGCCT 2388252 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || ||||| ||||| | || | |||||||||||| || || || || |||||| Sbjct 2388638 TCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTG 2388579 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||| || | | |||||| || | |||| | Sbjct 2388578 TCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATG 2388519 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| || || |||||||| ||||| Sbjct 2388518 GTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 >seq1 Length=2640167 Score = 98.7 bits (108), Expect = 1e-15 Identities = 180/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 |||||||||||||| ||||||| ||||||||| | || ||||| || || || Sbjct 599366 AGGCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTG 599307 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||||| || | |||||| ||||||| | ||||| || ||||| ||| Sbjct 599306 AGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAG 599247 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CT 120818 || | || || || ||||| ||||| | | ||| | || | | |||| || Sbjct 599246 AATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCT 599187 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGC 120878 | |||||| || |||||| |||||||| || | |||||| || ||| | ||| Sbjct 599186 G-AGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCTATCGC 599128 Query 120879 GTTCAGCAGCATGTCGCGCTC 120899 || | ||| | |||||||| Sbjct 599127 GTCGAACAGAAACTCGCGCTC 599107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419748559760