Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 221 2e-51 seq109 114 2e-19 seq98 93.3 6e-13 seq87 91.5 2e-12 seq35 87.8 3e-11 >seq1 Length=2640167 Score = 221 bits (244), Expect = 2e-51 Identities = 364/513 (71%), Gaps = 24/513 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || |||||||| |||||| | |||| Sbjct 597077 GATTTGGCAAATGTAC-AAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATGGACC 597019 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| || || | |||| ||||||| | ||| Sbjct 597018 TCTCCAAGGATCTTCACG----ACTGGACCAACCGTCTCAACGACAACGAGCGATACTTC 596963 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| ||||||||||| || |||||| ||| || || || ||| ||||| | Sbjct 596962 ATCTCGCATGTCCTCGCCTTCTT-CGCCGCGTCCGACGGTATTGTCAACGAAAACCTCGT 596904 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | || ||||| || | | ||||| || | || ||||| |||||||| Sbjct 596903 CGAGCGTTTCAGCAACGAGGTGCAGGTCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGAT 596844 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||| || || || ||||| ||| |||| || Sbjct 596843 CATGATGGAGAACATCCACTCCGAGACGTACTCCCTGCTCATTGACACGTACATCAAAGA 596784 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 |||| || || ||||| || ||||||||| || | || | | | ||| || Sbjct 596783 CCCGAAGCAGCGCGAGCACCTGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAA 596724 Query 1456128 GGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 |||||| ||||| | |||||| |||| || | || ||| || ||||| Sbjct 596723 GGCCGATTGGGCCCTCCGCTGGATCTCTGACAA-GAAATCTTC----CTTCGCTGAGCGC 596669 Query 1456185 CTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTT 1456242 || |||| || |||| ||||||||| ||||| ||||| || ||| ||| ||||||| Sbjct 596668 CTTGTCGCGTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCCATCTT 596610 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || |||||||||||||| Sbjct 596609 CTGGCTCAAGAAGCGTGGACTCATGCCCGGTCT 596577 Score = 187 bits (206), Expect = 4e-41 Identities = 358/512 (70%), Gaps = 22/512 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| |||||| | |||||||| || ||||| || || ||| | |||| Sbjct 598806 GATCTGGCAGATGTACAAAAAAG-CAGAGGCCTCGTTCTGGACAGCAGAAGAGCTGGACC 598864 Query 1455835 TCGGCGCCGACACGGTCCACTGGGT-GTCG--CTGAGCGACGACGAGCGCCATTTCATCA 1455891 | || ||| | ||||| | | || | | | |||||||||| ||||||| Sbjct 598865 TGGGGCATGACCTCATGGACTGGAACGACAAACTCACCCAGGACGAGCGCCGTTTCATCT 598924 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||| || || || |||||| ||| ||||| || ||||||||| | | Sbjct 598925 CCCACGTCCTTGCATTCTT-CGCCGCGTCCGACGGCATTGTAAACGAGAACCTCGTTGAA 598983 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| || ||||| || |||| || |||| || ||||| |||||||| Sbjct 598984 CGCTTCTCAAACGAGGTACAGGCTGCAGAAGCTCGTTGCTTCTACGGCTTCCAGATAATG 599043 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| || || || || || || ||||| || ||||||||| |||||||||| Sbjct 599044 ATGGAGAACATACATTCGGAGACATATTCCCTCCTAATTGACACCTACATCAAGGACCC- 599102 Query 1456072 GTCGAGAAGGACCACCTCT-TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 || ||| | ||| |||| ||| || || || | |||| | | ||| |||| Sbjct 599103 -TCAAGAGCGCGAGTTTCTGTTCGACGCGATAGAGACCATCCCGTGCATCAAGAAGAAGG 599161 Query 1456130 CCGACTGGGCGATGAAGTGGATCA---ACAAG-GAGGGCCTCGACACTTTGCCGAGCGGC 1456185 |||||||||| || |||||| ||||| || || || || | ||| ||| Sbjct 599162 CCGACTGGGCCCTGCGCTGGATCTCAGACAAGCGA-----TCATCA-TTCGGCGAAAGGC 599215 Query 1456186 TCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA-TCTTT 1456243 | |||| ||||| ||| |||| || || || |||||||| ||||| |||| || | || Sbjct 599216 TTGTCGCGTTTGCTGCGGTCGAAGGAATATTCTTCTCGGGAAGTTT-TGCGTCAATATTC 599274 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || ||||||||||| || Sbjct 599275 TGGCTCAAGAAGCGGGGGCTCATGCCCGGCCT 599306 Score = 152 bits (168), Expect = 7e-31 Identities = 163/210 (78%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 ||||| || |||||||| ||||||||| | | |||||||||||| ||||| || || | Sbjct 596365 CTGCCCGTCGCGCTCATTGGCATGAACTCGAA-GCTCATGTGCCAATACATCGAGTTC-G 596308 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 |||||||||| ||||||| |||||||| || |||||| |||| || ||||||| Sbjct 596307 TCGCCGACCGTCTGCTCGTCGCGCTCGG-TGACGAGAAGGTCTACAACGCGACCAACCCC 596249 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG 1456750 || | ||||| ||||||||||| |||||||||||||||| |||||| || ||| Sbjct 596248 TTTGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGTG 596189 Query 1456751 -GCGAGTACGCCAAGGCCGGCGTCACCGCC 1456779 ||| ||| ||||||| || |||| |||| Sbjct 596188 TCCGACTACTCCAAGGCTGGTGTCAACGCC 596159 Score = 91.5 bits (100), Expect = 2e-12 Identities = 118/159 (74%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||| |||||||| | || ||| |||||||||| || ||| ||||| || || | Sbjct 599526 CTCATCGGTATGAACGCTGCT-CTGATGCGCCAGTACATCGAGTTT-GTCGCAGATCGGC 599583 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | | | | || ||| || ||||||||||| || | || |||||| | ||| Sbjct 599584 TCTTGGTCTCCCTAGGCAACG-AGAAGCACTACAACGCGACGAATCCGTTCGACTTCATG 599642 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||||| || ||| |||||||||| |||||||||||| Sbjct 599643 GACTTGATATCACTCCAGGGCAAGACAAACTTTTTCGAG 599681 >seq109 Length=2399336 Score = 114 bits (126), Expect = 2e-19 Identities = 166/229 (72%), Gaps = 18/229 (8%) Strand=Plus/Plus Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979 || ||||||||||| ||||| || | | ||| || |||||| | ||| | ||| Sbjct 1332398 GTCCTCAAGCAGGTCCACCCTGACACTGGT-----ATC-TCGAACAAGGCGATGGCCATC 1332451 Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC--CTGG 725037 | |||||||| || ||||| || |||| ||||| | ||||||||| |||| || | Sbjct 1332452 CTCAACTCGTTCGTGAACGATATTTTCGAGCGCATTGCCACCGAGGC--GTCGAAGCTTG 1332509 Query 725038 CGCG---CTCCAACAAG-CGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || ||| || ||| || |||||| | |||| |||||||| |||||||||||| Sbjct 1332510 CGTCATACTCGAAGAAGTCG----ACGATCTCCTCGCGTGAGATCCAAACCGCCGTGCGC 1332565 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| | | || || || |||| ||||||| |||| |||||||||| Sbjct 1332566 CTCATCCTCCCTGGTGAGCTCGCCAAGCACGCCATCTCTGAGGGCACCA 1332614 >seq98 Length=2497588 Score = 93.3 bits (102), Expect = 6e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 ||||| || || |||||||| || | || ||| |||| | | ||| |||| || || Sbjct 783721 CGCAGTATAGCGCAACGGCTTTGTATGGGCTCAATGATCTTGTTGGACATGTTACACGCT 783780 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 || ||||||||||| || || | || | |||||||| ||| || || || || || Sbjct 783781 AGCGCAAACCGCGTGGTGTTCGAATAAATCTCCATGGTTCTCCGCAGTGCTTGCTGTGCT 783840 Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 | || || | || ||| || || || ||||||| ||||||||||| ||| |||| || Sbjct 783841 CCGGGTGTCATGCTGTCAGCTTCATCCAGGATGACTATCTTGTGGCGGCCGGGCGGAAG 783899 >seq87 Length=2533944 Score = 91.5 bits (100), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 |||||||||||||||| ||||||||||| ||| | | || || ||||||| ||||||| Sbjct 111036 CGCGCGAGATCCAGACTGCCGTGCGCCTCATCCTTCCGGGTGAGCTGGCCAAGCACGCCA 110977 Query 725128 TCTCCGAGGGCACCA 725142 ||||||||||||||| Sbjct 110976 TCTCCGAGGGCACCA 110962 >seq35 Length=923662 Score = 87.8 bits (96), Expect = 3e-11 Identities = 197/296 (67%), Gaps = 19/296 (6%) Strand=Plus/Minus Query 259796 GAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTC 259855 |||||||| ||| | |||| |||||||| || | || | | ||| || ||| || Sbjct 867192 GAGCGGCCACAGCACCTGCTTATGCGTGTTGCTGTCGGTATTCACGGG---GCTGACATC 867136 Query 259856 GACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACC 259915 ||| |||| | ||| |||||| | |||||| ||| || ||||| Sbjct 867135 GACCGTGCGATCGAG------------ACCTACAACCTCATGTCCGAGCGATTCTTCACA 867088 Query 259916 TCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTT 259975 || |||| |||||||| || || || || || ||||||| || ||||| Sbjct 867087 CATGCTTCGCCAACGCTCTTCAACGCGGGTACACCCAACCCGCAGCTCAGCTCATGCTTC 867028 Query 259976 CTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCG 260035 ||| | |||||||| |||||||||||||||||| || || || || ||| | |||||| Sbjct 867027 CTGGTCTGCATGAAGGACGATTCGATCGAGGGCATTTACGATACCCTGAAGAACTGCGCG 866968 Query 260036 CTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGCC 260089 | || ||| | || || || |||||| | | ||| ||||| | |||||| Sbjct 866967 ATGATTAGTAAGACCGCTGGTGGTATCGGTCT--CAGCATCCACAATATTCGCGCC 866914 Score = 86.0 bits (94), Expect = 9e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| ||| | ||||||||| |||| ||||||||||| || ||| ||||||||| Sbjct 880747 GCCGACCTCGTCTCCTGGGGCGCCATCGGCGCGCGCACCACTGAATCCCAAGTGCACCGC 880688 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 ||| | | || ||||| | |||| | |||||||| || ||||||||||| Sbjct 880687 GAGCTCGTTTCTGCGCTTTCAATGCCGACGGGCTTCAAGAATTCCACCGACGGCA 880633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177794417380188