Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq120 147 2e-30 seq98 125 6e-24 >seq120 Length=2004100 Score = 147 bits (162), Expect = 2e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| |||||||||||||||| ||| || || |||| || |||||||| || ||||| Sbjct 1879472 TCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAA 1879531 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| ||||| || ||||||||| |||||| ||||| | | Sbjct 1879532 ATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTA 1879591 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||||| ||||| | |||||| || || ||||||| || || ||| Sbjct 1879592 TCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTCTTGACA 1879651 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1879652 AAGATCTGCAT 1879662 Score = 125 bits (138), Expect = 6e-24 Identities = 155/208 (75%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || || |||||||| || ||||| Sbjct 1879751 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAA 1879810 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | || Sbjct 1879811 GATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1879869 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||| | ||||| || || ||||| | ||| |||| Sbjct 1879870 TGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTCTTCA 1879929 Query 35724 CAAATATCTGCATTCTGT-GCGCACACA 35750 | ||||||||||| |||| ||||| ||| Sbjct 1879930 CGAATATCTGCATGCTGTCGCGCATACA 1879957 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||| | || | ||| |||||||| || |||||||| |||| Sbjct 1878648 CCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1878707 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| |||| || || ||||| || || || |||| ||||||||||| | || Sbjct 1878708 AGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 1878767 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| ||||||| ||| | |||| | | ||||||| || || || Sbjct 1878768 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGA-CGTTGTCGATCGTGTCGGAAGACTCAAC 1878826 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || ||||| || || || | || || ||||| || ||||| Sbjct 1878827 CTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 107 bits (118), Expect = 2e-18 Identities = 142/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || |||| |||||||||||||| ||||| Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 1879025 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || ||||||||| |||||| ||| | || Sbjct 1879026 -ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGT 1879083 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||||||| || || |||| || |||| Sbjct 1879084 TGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCA 1879143 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 1879144 CGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||| | ||| | ||| |||||| || ||||| || || | Sbjct 2388710 CCACCACGGAGGCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAA 2388651 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| | || || || ||||| |||||||| ||||||||||||||||| | ||| Sbjct 2388650 AGGGTACGCCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGA 2388591 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||| || || |||||| Sbjct 2388590 ATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACC 2388531 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || |||||||| || ||||| || || ||||| Sbjct 2388530 TCCAGAGTGATGGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | || ||| || |||| || |||||||| || || || Sbjct 2388447 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 2388388 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| || || | || | || |||||||||| ||||| ||| | || Sbjct 2388387 GATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGA-CGT 2388329 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||||| ||| || || || || || | || || | Sbjct 2388328 TGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTGCCGGTAAGGGTCTTGA 2388269 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 2388268 CAAAGATCTGCAT 2388256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792619523920