Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=2640167 Score = 118 bits (130), Expect = 1e-21 Identities = 365/559 (65%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | |||||| || || || || | ||||| || || ||||| Sbjct 596519 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAG 596578 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| |||||||| || |||| || || || ||||| ||||| Sbjct 596579 ACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAA 596638 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---GTAACTTGTATCATTATG 39792 ||| || || || || || || || ||||| | ||| | | || | | | | | Sbjct 596639 GATACCCTCGACGGCGGCGAACGCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTCAGA 596698 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | |||||||| || |||||||| | || || || || || || || | Sbjct 596699 GATCCAGCGGAGGGCCCAATCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTC 596758 Query 39853 AAAGAGATAAT-GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 || || | | | | | || ||||| | || || || || | ||| ||| Sbjct 596759 GAACAGGTGCTCGCGCTGCTTC-GGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACG 596817 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || |||||||| || ||| ||||| || ||||| || || | || |||| | Sbjct 596818 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGA 596877 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 || ||||| | || | || | | ||||| || || || || || |||| Sbjct 596878 CCTGCACCTCGTTGCTGAAACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGG 596937 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCA-ATTTATTCC 40088 | || || || | ||||| || || ||| || | | | || | || ||| Sbjct 596938 CGAAGAAGGCGAGGACATGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCC 596997 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | | ||| || || | || | || ||||| ||||| ||||| ||||| |||| Sbjct 596998 AGTCGTGAAGATCCTTGGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCCTCGGCCT 597057 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 597058 TCTTGTACATTTGCCAAAT 597076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907305973360