Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=2640167 Score = 98.7 bits (108), Expect = 8e-16 Identities = 366/566 (65%), Gaps = 22/566 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||| ||||||||||||||| |||| || || |||||||||||||| | || || Sbjct 598807 ATCTGGCAGATGTACAAAAAAGCAGAGGCCTCGTTCTGGACAGCAGAAGAGCTGGACCTG 598866 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACA---AGAAAAA----CATTTTAT 43842 | ||| | ||| | | | | | || | || || | | | ||| || Sbjct 598867 GGGCATGACCT----CATGGACTGGAACGACAAACTCACCCAGGACGAGCGCCGTTTCAT 598922 Query 43843 ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAG 43902 || || | || || || || ||| |||||| || || || || || | ||| Sbjct 598923 CTCCCACGTCCTTGCATTCTTCGCCGCGTCCGACGGCATTGTAAACGAGAACCTCGTTGA 598982 Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 || || | | || || || ||||||| || || || || || || || || Sbjct 598983 ACGCTTCTCAAACGAGGTACAGGCTGCAGAAGCTCGTTGCTTCTACGGCTTCCAGATAAT 599042 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG 44022 || || || || |||||||| | || || || || || || |||||||| || Sbjct 599043 GATGGAGAACATACATTCGGAGACATATTCCCTCCTAATTGACACCTACATCAAGGACCC 599102 Query 44023 GCACGAGA---AGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATA 44078 || ||| || || |||| | |||||||| || | || ||| || || | | Sbjct 599103 TCAAGAGCGCGAGTTTC---TGTTCGACGCGATAGAGACCATCCCGTGC-ATCAAGAAGA 599158 Query 44079 AAGCAGACTGGGCCCTTAAATGGATAA-ATTCAAATGAT--TCTTTTGGAGAACGACTTG 44135 | || ||||||||||| ||||| | ||| ||| || || || ||| | |||| Sbjct 599159 AGGCCGACTGGGCCCTGCGCTGGATCTCAGACAAGCGATCATCATTCGGCGAAAGGCTTG 599218 Query 44136 TCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGT 44195 |||||||||| | || ||||| || ||||| || ||| |||||| | ||||| ||| Sbjct 599219 TCGCGTTTGCTGCGGTCGAAGGAATATTCTTCTCGGGAAGTTTTGCGTCAATATTCTGGC 599278 Query 44196 TAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATG 44255 | ||||| || || | ||||| || | || || || |||||| | || || | || | Sbjct 599279 TCAAGAAGCGGGGGCTCATGCCCGGCCTCACCTTCTCGAATGAGCTCATCAGCAGAGACG 599338 Query 44256 AAGGCTTACATTGCGATTTTGCTTGC 44281 | ||| | || ||| ||||| ||| Sbjct 599339 AGGGCATGCACACCGACTTTGCGTGC 599364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455157144870