Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq120 95.1 1e-14 >seq120 Length=2004100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||| ||| || | || |||| |||||||| || || Sbjct 1879466 GTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGCTGCTTGCCA 1879525 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || ||||||||||||| || ||||| || | || || || || ||||||| ||| Sbjct 1879526 GCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1879585 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | ||| || || || || || | ||||||||||| || Sbjct 1879586 ACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTC 1879645 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 1879646 TTGACAAAGATCTGCAT 1879662 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||| ||| | | |||| | || || ||||| || ||| Sbjct 1879746 GTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 1879805 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| || || || || | ||||| || || ||||||| || Sbjct 1879806 GCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1879865 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | || || || || || || || | |||||||| ||||| Sbjct 1879866 ACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTC 1879925 Query 27231 TTCACAAAGATTTGCATAGCTG 27252 ||||| || || ||||| |||| Sbjct 1879926 TTCACGAATATCTGCAT-GCTG 1879946 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||| | | | ||| |||| ||||| || || |||||| | Sbjct 1878684 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAG 1878743 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || |||||||| || || ||||| | || || || || |||||| || | | | Sbjct 1878744 ATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTG 1878803 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||||| || || || || | ||||| || || || || ||| Sbjct 1878804 TCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACA 1878863 Query 27237 AAGATTTGCAT 27247 ||||||||||| Sbjct 1878864 AAGATTTGCAT 1878874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933498873488