Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 >seq1 Length=2640167 Score = 113 bits (124), Expect = 1e-19 Identities = 367/551 (67%), Gaps = 23/551 (4%) Strand=Plus/Minus Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 |||| ||| |||||| |||||||| || ||||||||||| | ||| |||| | | Sbjct 597050 GGCCTCGTTCTGGACCGCTGAGGAGATGGACCTCTCCAAGGATCTTCACGACTGGACCAA 596991 Query 443390 ACGACT-ATCTAGCCATGAACGCGATTTCTTCAAAT-GCATCT--TGGCCTTCTTTGCAC 443445 || || | | | | | || ||||| ||||| | |||| | | |||||||| || Sbjct 596990 CCGTCTCAACGA-CAACGA--GCGATA-CTTCATCTCGCATGTCCTCGCCTTCTTCGCCG 596935 Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505 || ||||||||| ||| || || || || ||||||| | | ||| | | Sbjct 596934 CGTCCGACGGTATTGTCAACGAAAACCTCGTCGAGCGTTTCAGCAACGAGGTGCAGGTCG 596875 Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565 | |||||||||| |||||||| ||||| | ||||||||||| ||| ||||| | Sbjct 596874 CTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACGT 596815 Query 443566 ACAGTCAGTTGATCAAGACAC-TAATTCCGAACGAAGACGAA-CAGCG-GTCCATCTTCT 443622 || | | | || ||||| || || || || |||| ||||| | || || | Sbjct 596814 ACTCCCTGCTCATT--GACACGTACATC--AAAGACC-CGAAGCAGCGCGAGCACCTGTT 596760 Query 443623 CATCGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG-- 443678 | || || ||||| || |||| | | ||| | ||||| | ||| Sbjct 596759 CGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCCGATTGGGCCCTCCGCTGGAT 596700 Query 443679 CTCGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGA 443738 ||| || ||||| || ||||| ||||| || ||||| || || | ||||| || Sbjct 596699 CTCTGACAAGAAATCTTC--CTTCGCTGAGCGCCTTGTCGCGTTCGCCGCCGTCGAGGGT 596642 Query 443739 CTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCA 443798 | || || || ||| || |||||||||||| | || ||||||||||| |||| Sbjct 596641 ATCTTCTTCTCTGGTTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGTGGACTCATGCC 596583 Query 443799 CGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 |||||| ||||| ||||| || ||||| |||||||||| |||| ||||||||| Sbjct 596582 CGGTCTCACCTTCTCGAACGAGCTCATCAGCAGGGACGAGGGCATGCACACCGACTTCGC 596523 Query 443859 CTGTCTTCTCT 443869 ||| || |||| Sbjct 596522 CTGCCTCCTCT 596512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588332459003430