Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 seq13 91.5 2e-13 seq98 87.8 2e-12 >seq1 Length=2640167 Score = 141 bits (156), Expect = 1e-28 Identities = 341/506 (67%), Gaps = 15/506 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| | | |||||| || ||||||||| ||||| |||||||| || |||||| Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | || || |||||||||||||| ||||| || |||||| Sbjct 596601 TTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAC 596660 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA---AACCACTTCATCGCCCAC 130210 || | || |||||||| ||||| || || | ||| | ||| | ||||| Sbjct 596661 GCGACAAGGCGCTCAGCGAAGGA---AGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAA 596717 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 130269 | ||||| |||| || || |||| ||||| ||| || || || || | || | | | Sbjct 596718 TCGGCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGCTGC 596777 Query 130270 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TT 130328 | || |||||||||||| | || ||||| || || || ||| |||| | | Sbjct 596778 T-TCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 596836 Query 130329 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGC-A 130387 ||| || | ||| | ||||||| |||| || || | ||| ||||| | ||| Sbjct 596837 CATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGT-TGCTG 596894 Query 130388 AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 130447 ||| | || || || ||||| || |||||| | || || || || |||| | Sbjct 596895 AAACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACA 596954 Query 130448 TACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTC 130504 | | ||||| | | || || ||||| | || | ||||||||| ||||||||| Sbjct 596955 TGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCGTGAAGATCCTTG 597014 Query 130505 GAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||| || | |||||| || ||||| Sbjct 597015 GAGAGGTCCATCTCCTCAGCGGTCCA 597040 >seq13 Length=966363 Score = 91.5 bits (100), Expect = 2e-13 Identities = 212/313 (68%), Gaps = 14/313 (4%) Strand=Plus/Minus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||||||||| ||||| ||| |||| || || || ||| || | || ||||| Sbjct 190832 ATCCGTCATGATCATGAGCTGACCGTATCGCAGGTCGCTCGTGTCCTTGTAGTCCTTGTT 190773 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGA-GATCATTGAACT-CTTGGTT-----TGATGTGA 179920 || || ||||| | |||||||||| | || |||| | | | ||| |||| || Sbjct 190772 GTGCTGGAGACCGAGAATCTTCTTGATGTTC--TGAATTTCCTCGTTCTTCATGATCTG- 190716 Query 179921 GTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGT 179980 || | || || || || ||||| || | ||| || || || ||||| ||||| | Sbjct 190715 GTCGTGCT--TG--GCTTCGCGGACGTTCAGAAGCTTTCCTCGAAGCGGGAAGACACCAT 190660 Query 179981 AGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCT 180040 ||| || ||||||| ||| || || || || || | || ||| ||||| || || | Sbjct 190659 AGTTGTCGCGACCAATAACACTAAGGCCTGCCACGGCCAAGGACTTGGCGGAGTCTCCTT 190600 Query 180041 CCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCA 180100 |||||| |||||| ||||| || | | | || ||||| |||||||||||| || Sbjct 190599 CCGTCAGGATGAGGGTACAGTTGGACGCATTTCTTGTTCCTGCATTGTTCGCGTCGGACA 190540 Query 180101 ACTTGGGAATACC 180113 |||||| | ||| Sbjct 190539 GCTTGGGGAGACC 190527 >seq98 Length=2497588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292 |||||| | ||| || |||||||| | ||| || || || || || | ||| | Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTGGCCAT 1730105 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352 |||||| || || || | || |||||||| || ||||| || || || | || Sbjct 1730104 GGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGGA 1730045 Query 14353 GGCGGAACATTGGAT-GAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411 | |||| || | | ||||||||| || | ||| |||||| ||||| ||||||||||| Sbjct 1730044 GCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGGG 1729986 Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 |||| || || || || || | |||| |||||| || || ||| | ||||| Sbjct 1729985 TCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACC 1729931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433854903440