Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq98 105 8e-18 seq68 93.3 5e-14 >seq1 Length=2640167 Score = 134 bits (148), Expect = 2e-26 Identities = 172/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| || || || |||||| | || | || || ||| | ||||| || |||||||| Sbjct 596769 AGCACCTGTTCGACGCCATCGAGACCATCCCCTGCATTAAGAAGAAGGCCGATTGGGCCC 596710 Query 94769 TGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | ||| | ||| | || || |||||| |||||||| || |||| || || Sbjct 596709 TCCGCTGGATCTCTGACAAGAAATC---TTCCTTCGCTGAGCGCCTTGTCGCGTTCGCCG 596653 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 94884 || ||||||||||||||||||||||||||| ||| | || | |||||||||||||| Sbjct 596652 CCGTCGAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGT 596594 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || |||||||| |||||| |||||| |||||||| ||| | |||||||| Sbjct 596593 GGACTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCAGCAGGGACGAGGG 596541 >seq98 Length=2497588 Score = 105 bits (116), Expect = 8e-18 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 9752 ||| || | |||||| || ||||| | |||||| ||||| || || ||| | || | Sbjct 1730164 CTTACCAATGGCATCGATTTCATCCACGAAGACAATGCACGGCGCGTTCTTCTTG-GCCA 1730106 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 ||||||| ||||| || || || ||| ||||| || ||||| || || || | | Sbjct 1730105 TGGCAAAGAGGTCCCGGACGCGAGAGGAGCCGACACCGACGAACATTTCGACGAACTCGG 1730046 Query 9813 CGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | |||| || | | |||||||||||| | ||| ||||| ||||| |||||| || Sbjct 1730045 AGCCGGA-CACGGAAAAGAAGGGGACATTGGCTTCGCCCGCGGTGGCTTTGGCGAGGAGG 1729987 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||||| ||||| || ||| | || | |||||| || |||||||| || || Sbjct 1729986 GTCTTACCAGTACCGGGAGGACCGGAAAGAATGGCACCGCGAGGAATCTTAGCACC 1729931 >seq68 Length=814117 Score = 93.3 bits (102), Expect = 5e-14 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | ||||||||||| || || ||| ||| || || || || || || || | | Sbjct 243444 CGCTTCTACCAAGCCTCGACATCTGAGCTGTACGGAAAGGTTGTCGAGACGCCGCAGAGC 243503 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351 ||| ||| ||||||||||| |||||| ||||| ||| | ||| | || | ||| Sbjct 243504 GAGACGACGCCCTTCTACCCGCGCTCGCCGTACGGTGTCGCGAAGCTGTACGCGTACTGG 243563 Query 7352 CTC---GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTC 7408 || ||| || ||||||||| | ||||| ||| |||||| ||| ||||||||| Sbjct 243564 ATCACGGTC---AACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGCATCCTCTTC 243620 Query 7409 AACCATGAATCACCGAGACGAGG 7431 ||||| || || ||| | || || Sbjct 243621 AACCACGAGTCGCCGCGGCGCGG 243643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259531407760