Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq120 149 2e-30 seq98 129 2e-24 seq109 118 3e-21 >seq120 Length=2004100 Score = 149 bits (164), Expect = 2e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| || || |||||||| || |||||||| | Sbjct 1879150 TTTGCATACCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGT 1879209 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||| || || || || || ||||| || || ||||||| Sbjct 1879210 AATCCGAAAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGAT 1879269 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || |||||||| || || || || || || || | || || | Sbjct 1879270 CTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACG 1879329 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| || || || || || || || |||||||| Sbjct 1879330 ACTCGACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 || || ||||| || || || ||||| || ||||| || || || || || || || || Sbjct 1879457 AGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGC 1879516 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || |||||||| || ||||| ||||| || |||||||| ||||| || ||||| || Sbjct 1879517 TGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATC 1879576 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || ||||||||||| | || || | ||| || || || || | ||||| || Sbjct 1879577 TTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCC 1879636 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| |||||||| Sbjct 1879637 GTCAGGGTCTTGACAAAGATCTGCAT 1879662 >seq98 Length=2497588 Score = 129 bits (142), Expect = 2e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||||||||| || || || ||||| || || | || || ||||| || | Sbjct 2387954 CAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2387895 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| || ||||| || || || ||||| ||||| || || || | Sbjct 2387894 GCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 2387835 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | || |||| || |||||||| || | ||||| | Sbjct 2387834 TCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGC 2387775 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || ||||||||| Sbjct 2387774 CCGTGAGGGTCTTGACGAAGATCTGCATT 2387746 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| || ||||| || |||||||| || || || || || Sbjct 2387749 CATTCCGCCACGAAGACGCAGAACGAGGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTC 2387690 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| || || |||||||||||||| || || ||||||||||| Sbjct 2387689 GGACAGCGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGATCAGG 2387630 Query 140627 AGGAATTC 140634 || |||| Sbjct 2387629 GGGGATTC 2387622 >seq109 Length=2399336 Score = 118 bits (130), Expect = 3e-21 Identities = 247/368 (67%), Gaps = 0/368 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || || || || ||||| | | || |||||||| | || || || || | Sbjct 1649213 CCTGAGGAGATCTCGTCCATGGTCCTCCTCAAGATGAAGGAGACCGCCGAGGCGTACCTT 1649154 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | || || || | || ||| | ||||| || ||||| || || || | |||||| Sbjct 1649153 GGCCAGACCGTCACCAACGCCGTTGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGT 1649094 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | ||| | || | || || || | || || || || Sbjct 1649093 CAGGCGACGAAGGATGCGGGTACCATCTCTGGTCTCAACGTCCTCCGTATCATCAACGAG 1649034 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || || || || || || | || | || || | Sbjct 1649033 CCCACCGCGGCGGCCATCGCGTACGGTCTCGACAAGAAGACCCAGGGCGAGCGCAACGTC 1648974 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||| | ||||| ||||| || ||||| || || || || | || ||||| Sbjct 1648973 CTCATCTTCGATCTCGGTGGAGGTACCTTCGATGTGTCGCTTCTGACCATCGAGGAGGGT 1648914 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || ||||||||||| || || |||||||| || || || ||||| Sbjct 1648913 ATCTTCGAGGTCAAGGCCACTGCTGGTGACACTCACCTTGGTGGTGAGGACTTCGATAAC 1648854 Query 349892 CGTCTCGT 349899 |||||||| Sbjct 1648853 CGTCTCGT 1648846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251021929722