Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq68 167 3e-36 seq1 138 1e-27 seq35 123 3e-23 seq13 84.2 2e-11 >seq68 Length=814117 Score = 167 bits (184), Expect = 3e-36 Identities = 369/546 (68%), Gaps = 13/546 (2%) Strand=Plus/Minus Query 158945 ACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGTT 159004 ||||||| | | ||| ||||| || ||||| | ||||||||| || || ||||| | Sbjct 243849 ACTCGCGCACGGGGTGTGTCTCGCCCGTCGCGAGCACAAAGTCTTCGGGCTTCGGCTGCT 243790 Query 159005 GGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCAT 159064 ||||||||||||||||| |||| ||||| || ||||||| |||||||||||||| || | Sbjct 243789 GGAGCATGAGCCACATGCCCTCAACGTAGTCGCGCGCGTGGCCCCAGTCGCGCTTCGCGT 243730 Query 159065 CCATGTTCCCGAGCT----CGATGACT--TTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118 | | ||| ||||| | | |||| || || | | || || || Sbjct 243729 CGAGGTTGCCGAGGTACAGACAGGACTGCTTGCCGAGCGAAAT---GTCGGCGGCGGCGC 243673 Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGC-TCCGCGCCGTTCCGACTCATGGTTAAACAGA 159177 ||| ||| ||||| || || ||| ||| |||||||| |||||| ||||| || || Sbjct 243672 GCGAGATTTTGCGGGTGACGAAC-GTGCGGCCGCGCCGCGGCGACTCGTGGTTGAAGAGG 243614 Query 159178 ATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCA 159237 |||||| | || ||| ||| | || | ||||||||| || || |||||||| | Sbjct 243613 ATGCCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTGACCGTGATCCAGTACGCG 243554 Query 159238 AAGAGCTTGGAGACGCCGTATGGACTCCGAGGATAAAATGGTGTCCCCTCATTTTGAATT 159297 | ||||| | ||| ||||| || || || || || || ||| ||| | || Sbjct 243553 TACAGCTTCGCGACACCGTACGGCGAGCGCGGGTAGAAGGGCGTCGTCTCGCTCTGCGGC 243494 Query 159298 GGTTCCTGAACCTTTCCAAACATTTCACTCGTCCCAGCCTGATAAAATTTGAATTTAGAA 159357 | || ||||||||| ||| ||| ||| || || || || | | Sbjct 243493 GTCTCGACAACCTTTCCGTACAGCTCAGATGTCGAGGCTTGGTAGAAGCGCACATGCTTC 243434 Query 159358 ACAAAATTGAATTGACGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTC 159417 | | | | ||| || || || || | || |||||||| | | |||||||| || Sbjct 243433 TCGAGGCCGCAGGTACGGATGGCGTCGAGCAGACGGAGGGTACCGAGGCCGTCGACG-TC 243375 Query 159418 GCC-GTGTACTCGGGCTGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATA 159476 ||| |||||||||| | |||||| || | ||||||||||||||| || |||||||| || Sbjct 243374 GCCGGTGTACTCGGCCATCTCAAACGAAACCTTCACGTGTGACTGTGCGCCGAGGTTGTA 243315 Query 159477 GACCTC 159482 ||| || Sbjct 243314 GACTTC 243309 Score = 132 bits (146), Expect = 5e-26 Identities = 243/354 (69%), Gaps = 3/354 (1%) Strand=Plus/Minus Query 124481 CGCCACCTCGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTC 124540 |||| ||||| | |||| || | | ||| ||||| ||||| | | ||| || ||||| Sbjct 243863 CGCCTTCTCGACATACTCGCGCACGGGGTGTGTCTCGCCCGTCGCGAGCACAAAGTCTTC 243804 Query 124541 GGGAATCGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCA 124600 ||| ||| |||||| | ||| ||||||||| | | |||||||| ||||| ||||| Sbjct 243803 GGGCTTCGGCTGCTGGAGCATGAGCCACATGCCCTCAACGTAGTCGCGCGCGTGGCCCCA 243744 Query 124601 GTCGCGCTTGGCATCCAGGTTTCCGAGCT--CGATTGGCTTGGCCGTCTTGTTCCA-CTC 124657 ||||||||| || || ||||| ||||| | || || || | | | | || Sbjct 243743 GTCGCGCTTCGCGTCGAGGTTGCCGAGGTACAGACAGGACTGCTTGCCGAGCGAAATGTC 243684 Query 124658 CGCCAAACCCAGTGTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGACTCGTG 124717 || | | | || ||||| || || ||| | ||||| ||| |||||||| Sbjct 243683 GGCGGCGGCGCGCGAGATTTTGCGGGTGACGAACGTGCGGCCGCGCCGCGGCGACTCGTG 243624 Query 124718 GTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCAT 124777 |||||| || ||||| | ||||| |||| ||||||| |||||||||||| ||| || Sbjct 243623 GTTGAAGAGGATGCCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTGACCGTGAT 243564 Query 124778 CCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 ||| ||| | | ||||| | || || || || || |||||||| || || Sbjct 243563 CCAGTACGCGTACAGCTTCGCGACACCGTACGGCGAGCGCGGGTAGAAGGGCGT 243510 >seq1 Length=2640167 Score = 138 bits (152), Expect = 1e-27 Identities = 344/511 (67%), Gaps = 20/511 (4%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| || |||||||| || | |||||||| || | ||||| ||||| || || ||||| Sbjct 599343 GCCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTT 599284 Query 74828 CTTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAA 74886 ||| | ||| || || | | || || || |||||| || |||||||| |||| Sbjct 599283 CTTGAGCCAGAATATTGACGCAAAACTTCCCGA-GAAGAATATTCCTTCGACCGCAGCAA 599225 Query 74887 AGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCAT 74942 | |||||||| | || |||| | || |||| ||| ||||| | | ||||| Sbjct 599224 ACGCGACAAGCCTTTCGCCGAATGATG-ATCGCTTGTCTGAGATCCAGCGCAGGGCCCAG 599166 Query 74943 TCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTC 74999 || || || |||| ||| |||| || || ||||| | ||| || || || | Sbjct 599165 TCGGCCTTCTTCTTGAT-GCACGGGATGGTCTCTATCGCGTCGAACAGAAACTCGCG--C 599109 Query 75000 TCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGAC 75059 |||| || ||||||| | ||||||| | || || || ||||||||||| || | Sbjct 599108 TCTTGAGGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATATGTCTCCGAATGTATGTTC 599049 Query 75060 TCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAA 75119 || | | |||| | ||||||| | || || |||||| |||||| || ||||| Sbjct 599048 TCCATCATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAGCCTGTACCTCGTTTGAG 598989 Query 75120 AA--ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTA 75177 || |||| ||| ||||| | || |||||||| || |||||||| || || || | Sbjct 598988 AAGCGTTCA--ACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCGAAGAATGCAAGGA 598931 Query 75178 CCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCC 75234 | ||| || ||||||| || | ||||||||||| ||| ||| | ||||| Sbjct 598930 CGTGGGAGATGAAACGGCGCTCGTCCTGGGTGAGTTTGTCGTTCCAGTCCATGAGGTCAT 598871 Query 75235 CCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | ||| || | ||| || | |||||||| Sbjct 598870 GCCCCAGGTCCAGCTCTTCTGCTGTCCAGAA 598840 Score = 125 bits (138), Expect = 8e-24 Identities = 339/509 (67%), Gaps = 16/509 (3%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| || || ||||| || | || ||||| || | || || ||||| ||||||||||| Sbjct 596540 GCCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTT 596599 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||||||| ||||||||| || ||||| || || Sbjct 596600 CTTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAA 596659 Query 74888 GGCGACAAGGCGTTGCGCGA---ACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTC 74944 ||||||||||| | |||| | | | | | || ||||| | ||||| || Sbjct 596660 CGCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAATC 596719 Query 74945 AGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAAGAG--GCTTGCCTTCTC 75001 || ||| | | | ||| |||| || ||||| || | ||| || ||| || | | Sbjct 596720 GGC-CTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGAACAGGTGCTCGCGCT-GC 596777 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 |||||| || |||| | | ||||||| | || ||||||||||| || || || ||| Sbjct 596778 TTCGGG-TCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 596836 Query 75062 GTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAA 75119 | | |||| | ||||||| | || ||||| || | ||| || || || |||| Sbjct 596837 CATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGTTGCTGAA 596896 Query 75120 AAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACC 75179 | || | ||| || || |||| || ||||| || |||||||| || || || || Sbjct 596897 ACGCTC--GACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACA 596954 Query 75180 ATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCC 75236 ||| |||| ||||| | ||| ||| | ||| ||| || | || ||| Sbjct 596955 TGCGAGATGAAGTATCGCTCGTTGTCGTTGAGACGGTTGGTCCAGTCGTGAAGATCCTTG 597014 Query 75237 GCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | | || |||||||| | |||||||| Sbjct 597015 GAGAGGTCCATCTCCTCAGCGGTCCAGAA 597043 >seq35 Length=923662 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || ||||||||| | |||| || || || ||||| |||| | | || ||||| Sbjct 866842 GGCACGAACGGCTATTCGAATGGCATTGTTCCCATGCTTCGCGCTTACGACGCAACGGCT 866783 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || || ||| |||||||||| ||||| ||| | |||||||||||||||||||| Sbjct 866782 CGCTATGTCGACCAGGGTGGCAATAAGCGTCCGGGTGCTTTCGCCATCTACCTCGAGCCC 866723 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 ||||||||||| || | || || |||| || ||| |||||| ||| | || ||| | Sbjct 866722 TGGCACGCCGATATCTTCGACTTCATCGACCTCCGTAAGAATCATGGTAAGGAGGAGGTT 866663 Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTT 53694 || ||| ||||| || ||| || ||||||||||| || ||||| Sbjct 866662 CGTGCCCGCGACCTCTTCTAC-GCGCTGTGGATTCCCGATCTCTT 866619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| ||| ||| ||| || |||||||| | ||||||| | | ||| | | Sbjct 865507 TCAAGGCGATCTACAAGACTGTCTGGGAGATCTCGCAGAAGAAGGTCCTCGACCTCGCCG 865448 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| |||| |||| |||| ||||| | | || ||| || Sbjct 865447 CAGACCGTGGCGCGTTCATCTGCCAGAGCCAGAGCTTGAACGTGCACCTGCAGAGCCCGA 865388 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | | || ||| |||||||| ||||| ||||||||||| |||||||| || | Sbjct 865387 CGATCGGCCAGCTGACGAGCATGCACTTCTACGGTTGGAAGAAGGGCCTCAAGACCGGCA 865328 Query 55908 TGTACTATCTGCGGACCCGCGCCAAGGCCAAGGC 55941 ||||||| || || || ||| || ||| |||| Sbjct 865327 TGTACTACCTCCGTACACGCCCCGCGGCGCAGGC 865294 >seq13 Length=966363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 213/320 (67%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 152812 TCGGTCATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACC-CGTAGACCTTTCC 152870 || ||||||||||| || ||||||| |||||||| | | ||| || |||| |||| Sbjct 190831 TCCGTCATGATCATGAGCTGACCGTATCGCAGGTCGC-TCGTGTCCTTGTAGTCCTTGTT 190773 Query 152871 ATGTTGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTT 152930 || || || ||||| ||||| |||| ||| || |||||| || | | | ||| | Sbjct 190772 GTGCTGGAGACCGAGAATCTTCTTGATGTTCTGAATTTCCTCGTTCTTCATGATCTGGTC 190713 Query 152931 CACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTT 152990 | |||| || || || || | ||||||| || || || || || || | || Sbjct 190712 GTGCTTGGCTTCGCGGACGTTCAGAAGCTTTCCTCGAAGCGGGAAGACACCATAGTTGTC 190653 Query 152991 GCGGCCTACAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGAT 153050 ||| || | ||| || || || || | || | || || || ||||| || || || | Sbjct 190652 GCGACCAATAACACTAAGGCCTGCCACGGCCAAGGACTTGGCGGAGTCTCCTTCCGTCAG 190593 Query 153051 AATAAGCGTACAGTCGTGAGACCGAT---GAGTACCGGCCCAGTTGGCGTCGTCAAGCTT 153107 || || ||||||| | ||| || || || || ||| |||||| ||||| Sbjct 190592 GATGAGGGTACAGTTG---GACGCATTTCTTGTTCCTGCATTGTTCGCGTCGGACAGCTT 190536 Query 153108 GGGGATTCCCGTGATCCTGC 153127 ||||| ||| ||| ||||| Sbjct 190535 GGGGAGACCCTTGAGCCTGC 190516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214809805200