Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq98 141 8e-29 seq120 114 1e-20 >seq98 Length=2497588 Score = 141 bits (156), Expect = 8e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || ||||||||| | ||||| || || || || |||| Sbjct 2388255 CATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTC 2388314 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || ||||| ||||| || ||||| ||||| ||||| Sbjct 2388315 CGACACTATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCA 2388374 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| || || | ||| ||||| || | || ||| || ||| | || |||||||| Sbjct 2388375 ACAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAA 2388434 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 2388435 CATCCAGAAGGAGTCGAC 2388452 >seq120 Length=2004100 Score = 114 bits (126), Expect = 1e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| ||||| || || ||||| |||||| | || || || || || ||| | Sbjct 1879666 CGGCATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAATC 1879607 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||||| | ||||| | || || || || || ||||| |||||||| || || || Sbjct 1879606 TTCCGACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGA 1879547 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATT 27162 || |||||| | || | || ||||| || | || ||| | || |||| ||||||| Sbjct 1879546 CCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTCGAGGACGGC-CGTACGTTGTCCGATT 1879488 Query 27163 ACAACATTCAAAAGGAGTCGAC 27184 |||||||||| ||||| || || Sbjct 1879487 ACAACATTCAGAAGGAATCCAC 1879466 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || ||||| || |||||| | || || || || || || | || Sbjct 1879943 CATGCAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 1879884 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || ||||| || ||||| ||||| || || Sbjct 1879883 TGACACTATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCA 1879824 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||||| || | || || | ||| | ||||||||||| Sbjct 1879823 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAA 1879764 Query 27167 CATTCAAAAGGAGTCGACC 27185 ||| || |||||||| ||| Sbjct 1879763 CATCCAGAAGGAGTCCACC 1879745 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||||||||||| | || || || || || || | || Sbjct 1879156 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCTTCG 1879097 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || || |||||||| || ||||| || || || || Sbjct 1879096 GATACCATTGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 1879037 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||| ||| || || |||| || |||||| Sbjct 1879036 CAGCGCCTGAT-TTTGCTGGTAAGCAGCTGGAGGACGGTCGCACTCTTTCGGACTACAAC 1878978 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| |||||||| ||| Sbjct 1878977 ATTCAGAAGGAGTCTACC 1878960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917454052480