Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq87 98.7 9e-16 >seq87 Length=2533944 Score = 98.7 bits (108), Expect = 9e-16 Identities = 248/378 (66%), Gaps = 22/378 (6%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT------- 34617 ||| |||| | ||||||||| |||| ||||||| | ||||| |||||||| Sbjct 243249 GATATCCCGCAGATGGCGCTACCCCA-TGCCACATGATGTGCCAGTTCTACGTGCACCTG 243307 Query 34618 --CGCGA------ATGGGGAGC------TGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 ||||| | | ||||| |||| |||| | || || ||||||| ||| Sbjct 243308 CCCGCGACGCCAGAAGAGGAGCCACGGCTGTCATGCCTTATGTACCAGCGATCGGCAGAT 243367 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCT 34723 |||| | || | ||||||||||| || ||||| || ||||| ||||| | || Sbjct 243368 CTGGGACTCGGAATTCCGTTCAACATCGCCTCGTACGCGCTCCTCACCCACATGGTTGCA 243427 Query 34724 CATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTAC 34783 | ||| ||| ||| || ||||| |||| | | || || || ||| ||||| Sbjct 243428 CGGGTCACGGGCACGGTCCCACACGAGCTCGTGCTGCAGCTCGGCGACGCTCATGTCTAC 243487 Query 34784 CTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAG 34843 | ||||| |||| |||||| || || | || |||||||| ||||||||| || Sbjct 243488 CGCGACCACGTCGACGCGCTCCGTCAGCAACTCGAGCGCGAGCCCCGCCCGTTCCCCAAG 243547 Query 34844 CTCAAAATTATTCGAGCCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTG 34903 || || || | ||| || ||||| ||||| | | |||||||||| | || Sbjct 243548 CTGCGCTTTGCGCGCGACGTGACGGACATCGACGACTTCAAGTTCGAGGACTTCATTGTG 243607 Query 34904 GAAGGGTACCGGCCGCAC 34921 ||||| ||| |||||| Sbjct 243608 GAAGGATACGACCCGCAC 243625 Score = 98.7 bits (108), Expect = 9e-16 Identities = 248/378 (66%), Gaps = 22/378 (6%) Strand=Plus/Minus Query 6424 GTGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGAC 6483 |||||| ||| ||||||| | |||||||||| | | ||||| ||||| || || Sbjct 243625 GTGCGGGTCGTATCCTTCCACAATGAAGTCCTCGAACTTGAAGTCGTCGATGTCCGTCAC 243566 Query 6484 GGCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAG 6543 | | || || |||| ||||||||| |||||||| || | || || ||||| Sbjct 243565 GTCGCGCGCAAAGCGCAGCTTGGGGAACGGGCGGGGCTCGCGCTCGAGTTGCTGACGGAG 243506 Query 6544 CCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGG 6603 | |||| ||||| |||||| ||| || || || | | |||| ||||| || Sbjct 243505 CGCGTCGACGTGGTCGCGGTAGACATGAGCGTCGCCGAGCTGCAGCACGAGCTCGTGTGG 243446 Query 6604 AACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAA 6663 ||| ||| ||| | || | ||||| ||||| || ||||| || |||||||| Sbjct 243445 GACCGTGCCCGTGACCCGTGCAACCATGTGGGTGAGGAGCGCGTACGAGGCGATGTTGAA 243386 Query 6664 CGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACA------GCTC 6717 ||| | || | |||| ||| ||||||| || || | |||| |||| |||| Sbjct 243385 CGGAATTCCGAGTCCCAGATCTGCCGATCGCTGGTACATAAGGCATGACAGCCGTGGCTC 243326 Query 6718 CCCAT------TCGCG---------ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAG 6762 | | | ||||| |||||||| ||||| | ||||||| |||| || Sbjct 243325 CTCTTCTGGCGTCGCGGGCAGGTGCACGTAGAACTGGCACATCATGTGGCA-TGGGGTAG 243267 Query 6763 CGCCATCAGAGGGAGATC 6780 ||||||| | |||| ||| Sbjct 243266 CGCCATCTGCGGGATATC 243249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261425029280