Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq98 192 1e-43 seq120 187 6e-42 seq79 98.7 2e-15 >seq98 Length=2497588 Score = 192 bits (212), Expect = 1e-43 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||| ||||| || ||||||||||| || | || || | ||||| || | Sbjct 2387954 CAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2387895 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| |||||||||||||| || |||| ||||||||||| |||| Sbjct 2387894 GCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 2387835 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| |||||||| || |||||||| || || || || || ||||||||||| | Sbjct 2387834 TCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGC 2387775 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||||| ||||| || || | ||||||| Sbjct 2387774 CCGTGAGGGTCTTGACGAAGATCTGCATT 2387746 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || |||||||| ||||||| ||||| | || || Sbjct 2388467 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCC 2388408 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| ||||| ||||| || | || ||||||||| Sbjct 2388407 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCC 2388348 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || ||||| || || || ||| Sbjct 2388347 TGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTC 2388288 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 2388287 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2388256 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| |||||||| || |||||||| || || | ||||| | ||| || Sbjct 2388239 AGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCC 2388180 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| ||||||||||| || || || | || ||||| ||| Sbjct 2388179 TCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCC 2388120 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || || || || || || ||||| | ||||| ||| Sbjct 2388119 TGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTC 2388060 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 2388059 TTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| || ||||||||||| || | |||||| | ||||| Sbjct 2388695 AGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCC 2388636 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || ||||| | || || ||||| || |||| || ||||||||| Sbjct 2388635 TCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 2388576 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || ||||| || ||||| |||||||| ||| Sbjct 2388575 TGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTC 2388516 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| | ||||| || || | ||||| Sbjct 2388515 TTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| |||||||| |||||||| || ||| || |||||| Sbjct 2387572 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTATCGGAGGACTCCACCTCG 2387513 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||||||||| ||||||||||| || || | |||||| Sbjct 2387512 AGGGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATCTGCAT 2387469 >seq120 Length=2004100 Score = 187 bits (206), Expect = 6e-42 Identities = 166/208 (80%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || |||||||| || |||||||| ||||| | ||||| | ||||| || | Sbjct 1879735 CAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAA 1879794 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| || ||||| || || || ||||| || |||| || ||||||||||||| Sbjct 1879795 GCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGA 1879854 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||| ||||||||| || |||||||| ||||| ||||| | Sbjct 1879855 TCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGC 1879914 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||||| || || | |||||| Sbjct 1879915 CCGTGAGAGTCTTCACGAATATCTGCAT 1879942 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || || || || ||||||| ||| || | |||||| Sbjct 1879173 AGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCT 1879232 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || || || ||||||| || ||||||||| Sbjct 1879233 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 1879292 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || ||||| || ||||||||| Sbjct 1879293 TGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTC 1879352 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 1879353 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| |||||||| || || || ||||| ||||| | | || | || || || ||| Sbjct 1879457 AGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGC 1879516 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| || || || || || || ||||| ||||||| |||||||||||||||||| Sbjct 1879517 TGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATC 1879576 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || ||||| || || |||||||| || ||| |||||||| ||||| ||||| ||| Sbjct 1879577 TTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCC 1879636 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| | |||||| Sbjct 1879637 GTCAGGGTCTTGACAAAGATCTGCAT 1879662 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||| ||| || |||||||| || || | ||||| | || || Sbjct 1878663 AGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCC 1878722 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || || ||||| || || | ||||||||||| Sbjct 1878723 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCT 1878782 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| || ||||||||||| || |||||| Sbjct 1878783 TGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTC 1878842 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | ||||| Sbjct 1878843 TTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 138 bits (152), Expect = 3e-27 Identities = 155/206 (75%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 |||||||| || ||||| || || ||||| || |||| ||| || | || || |||||| Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || || || ||||| || ||||| || |||| || |||||||| |||||| Sbjct 1879012 TGCTTACCAGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| || ||||| || || || |||||||| ||||||||||| || Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 >seq79 Length=745021 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| |||||||||||||| || |||||| Sbjct 401422 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCG 401481 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| |||||||| ||||| || || | |||||| || Sbjct 401482 AGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 401528 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| || |||||||| || || ||||| | ||||| Sbjct 401242 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 401301 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| || ||||||||||| || || Sbjct 401302 TCGAGCTGCTTGCCGGCGAAGATCAGTCGTTGTTGGTCTGGGGG 401345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149415815510