Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq98 111 1e-19 seq120 95.1 1e-14 >seq98 Length=2497588 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | ||| |||||| ||| || || || ||||| || | ||| || || | Sbjct 2388699 GCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCC 2388640 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || ||||| || || |||||||| || | ||||||||||| | ||| | | ||| || Sbjct 2388639 ATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTT 2388580 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| |||| | | | |||||| |||||||| |||| ||||| Sbjct 2388579 GTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGAT 2388520 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||||||||| ||| || || || |||||||| Sbjct 2388519 GGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 >seq120 Length=2004100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||||||||| || || || || || |||| || || || |||| || || || Sbjct 1878672 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGTTGC 1878731 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || || ||||| ||| || Sbjct 1878732 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTT 1878791 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | ||| ||| ||||| || || | || || | || || || Sbjct 1878792 GCCTTGA-CGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCTTGCCGGT 1878850 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || |||||||||||||| Sbjct 1878851 GAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | ||| || || |||| || ||||| || || ||||| Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 1879025 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| ||||| ||| ||| |||| ||| Sbjct 1879026 -ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGA-CGT 1879083 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||||| ||||| || || | |||||| | || || |||||||| || | Sbjct 1879084 TGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCA 1879143 Query 39272 CAAAGATTTGCAT 39284 | ||||||||||| Sbjct 1879144 CGAAGATTTGCAT 1879156 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 39075 CACCAAA-TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCAT 39133 |||||| || || ||| ||| || || || || ||||||| || || || | || | Sbjct 1879732 CACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 1879791 Query 39134 CAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCA 39193 ||||||| ||||| ||||| || |||||||||||||| | || | || ||| |||||| Sbjct 1879792 CAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCT 1879851 Query 39194 TGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || |||| ||| | | | || || ||||| || || | ||||| | Sbjct 1879852 GGATCTTGGCCTTGA-CGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTC 1879910 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || || || || ||||| Sbjct 1879911 TTGCCCGTGAGAGTCTTCACGAATATCTGCAT 1879942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544689094862