Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 >seq1 Length=2640167 Score = 150 bits (166), Expect = 2e-31 Identities = 290/424 (68%), Gaps = 8/424 (2%) Strand=Plus/Minus Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 |||||| | |||||||| || |||| || ||||||||||| || || || || || Sbjct 599373 AAACAAGAGGCACGCAAAGTCGGTGTGCATGCCCTCGTCTCTGCTGATGAGCTCATTCGA 599314 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 || || | |||||||| | || | ||| || ||||| ||||| | ||||| || Sbjct 599313 GAAGGTGAGGCCGGGCATGAGCCCCCGCTTCTTGAGCCAGAATATTGACGCAAAACTTCC 599254 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGG 4716 || |||||||| ||||| || || |||||||| || | | ||||| || | | | Sbjct 599253 CGAGAAGAATATTCCTTCGACCGCAGCAAACGCGACAAGCCTTTCGCCGAATGATGATCG 599194 Query 4717 CTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGT 4776 | |||||| ||||| | ||||||| || || ||||| | |||||| || || | Sbjct 599193 C-TTGTCTGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCT 599135 Query 4777 ATATAGCGTTAAA---TAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTA 4833 ||| |||| || || | | | || | ||||| | || || ||||| |||| Sbjct 599134 CTATCGCGTCGAACAGAAACTCGCGCTCTTGA---GGGTCCTTGATGTAGGTGTCAATTA 599078 Query 4834 GTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATC 4893 | ||| ||| | || |||||||| || || || ||||| || ||||| ||||| | Sbjct 599077 GGAGGGAATATGTCTCCGAATGTATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAAC 599018 Query 4894 TAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATAC 4953 |||||||| | || || ||||| | || | ||| || | ||| |||||||| || | Sbjct 599017 GAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGCGTTCAACGAGGTTCTCGTTTACAATGC 598958 Query 4954 CGTC 4957 |||| Sbjct 598957 CGTC 598954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048694387942