Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 >seq1 Length=2640167 Score = 150 bits (166), Expect = 2e-31 Identities = 358/538 (67%), Gaps = 10/538 (2%) Strand=Plus/Minus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || || ||||| || || | || || || || ||||| |||||||| || || || || Sbjct 599342 CCCTCGTCTCTGCTGATGAGCTCATTCGAGAAGGTGAGGCCGGGCATGAGCCCCCGCTTC 599283 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||| ||||||| ||| ||| ||| || |||||||| ||||| || || ||||| Sbjct 599282 TTGAGCCAGAATATTGACGCAAAACTTCCCGAGAAGAATATTCCTTCGACCGCAGCAAAC 599223 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCA 48338 ||| ||| || || ||| | | | |||| | ||||| || | ||||| || Sbjct 599222 GCGACAAGCCTTTCGCCGAATGATGATCGCTTGTCTGAGATCCAGCGCAGGGCCCAGTCG 599163 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||||||||||| | || || || || ||||| || | || ||||| | || | Sbjct 599162 GCCTTCTTCTTGATGCACGGGATGGTCTCTATCGCGTCGAACAGAAACTCGCGCTCTTGA 599103 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 || || | ||| || || |||| || ||| | || || || || || || || Sbjct 599102 GGGTCCTTGATGTAGGTGTCAATTAGGAGGGAATATGTCTCCGAATGTATGTTCTCCATC 599043 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGT 48518 ||||| || ||||| || || | ||||||| ||||||||| | | || ||| Sbjct 599042 ATTATCTGGAAGCCGTAGAAGCAACGAGCTTCTGCAGCCTGTACCTCGTTTGAGAAGCGT 598983 Query 48519 TCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTA 48578 ||| | | ||||| ||||| || || || || || || ||||| | || || Sbjct 598982 TCAACGAGGTTCTCGTTTACAATGCCGTCGGACGCGGCGAAGAATGCAAGGACGTGGGAG 598923 Query 48579 ATAAAATATTTTTCGT--TGGAAGTCAGTTT---ATTCCAGTCATTGATATCTTTTGATA 48633 || ||| |||| ||| || ||||| |||||||| ||| || | | Sbjct 598922 ATGAAACGGCGCTCGTCCTGG--GTGAGTTTGTCGTTCCAGTCCATGAGGTCATGCCCCA 598865 Query 48634 TATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 || | ||||| |||||||| || || |||||||||||||| ||||| | ||| || Sbjct 598864 GGTCCAGCTCTTCTGCTGTCCAGAACGAGGCCTCTGCTTTTTTGTACATCTGCCAGAT 598807 Score = 123 bits (136), Expect = 3e-23 Identities = 355/543 (65%), Gaps = 20/543 (4%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || || || || || || | ||||| || || |||||||||||||| |||||||| || Sbjct 596541 CCCTCGTCCCTGCTGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 596600 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||| || || | |||||| || ||||| ||||| || || || ||||| || || Sbjct 596601 TTGAGCCAGAAGATGGACGCGAAGGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAC 596660 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCA 48338 ||| ||| | ||| || | | || |||| ||||| || | |||||||| Sbjct 596661 GCGACAAGGCGCTCAGCGAAGGAAGATTTCTTGTCAGAGATCCAGCGGAGGGCCCAATCG 596720 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||||||||||| | || || || || || || || | | | || | | | || Sbjct 596721 GCCTTCTTCTTAATGCAGGGGATGGTCTCGATGGCGTCGA----ACAGGTGCTCGCGCTG 596776 Query 48399 CT----ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTC 48454 || ||||| | ||| || || || | || ||| | |||||||| || || || Sbjct 596777 CTTCGGGTCTTTGATGTACGTGTCAATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 596836 Query 48455 AATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAA 48514 || ||||| || ||||| || || | || || | || ||| ||||| | | || Sbjct 596837 CATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGACCTGCACCTCGTTGCTGAA 596896 Query 48515 TCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATG 48574 || || | | || || || || || || || || || || || || | ||||| Sbjct 596897 ACGCTCGACGAGGTTTTCGTTGACAATACCGTCGGACGCGGCGAAGAAGGCGAGGACATG 596956 Query 48575 TTTAATAAAATAT------TTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTT 48628 || || ||| || |||||| || | | || ||||||| | | ||| || Sbjct 596957 CGAGATGAAGTATCGCTCGTTGTCGTTG--AGAC-GGTTGGTCCAGTCGTGAAGATCCTT 597013 Query 48629 TGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCA 48688 || | || | || ||||| ||||| || || ||||| || || || ||||| | ||| Sbjct 597014 GGAGAGGTCCATCTCCTCAGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACATTTGCCA 597073 Query 48689 TAT 48691 || Sbjct 597074 AAT 597076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667289095360