Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq98 125 2e-23 seq120 116 9e-21 >seq98 Length=2497588 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || |||||||| || |||| | ||| | ||||| || | Sbjct 2387954 CAAGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2387895 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | || ||||| | | || |||||||| ||||| | Sbjct 2387894 GCTGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 2387835 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | |||| || ||| |||||||| || || || |||| Sbjct 2387834 TCTTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGC 2387775 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| ||||| ||||||| ||||||| Sbjct 2387774 CCGTGAGGGTCTTGACGAAGATCTGCATT 2387746 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||||| || |||||||||||||| | | || | Sbjct 2388474 GAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCG 2388415 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| | | ||| || || | | ||| || || Sbjct 2388414 ACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTC 2388355 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 2388354 CTTGTCCTGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGT 2388295 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || || ||||| || |||| |||||| Sbjct 2388294 AATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2388256 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || |||||||| || || | | || | |||||| Sbjct 2388695 AGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCC 2388636 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||| || ||||| | || ||||||||| | | || || ||||| || Sbjct 2388635 TCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 2388576 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | || ||| ||| || || ||||| || || Sbjct 2388575 TGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTC 2388516 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| | ||||||||||| | ||||| Sbjct 2388515 TTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 >seq120 Length=2004100 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || ||| || ||||||||||| |||| | || | ||| || Sbjct 1878663 AGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCC 1878722 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | || ||| |||||||| ||| Sbjct 1878723 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCT 1878782 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||||| | || | |||| ||| ||| || || || ||||| || Sbjct 1878783 TGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTC 1878842 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| || |||| ||||| Sbjct 1878843 TTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || |||||||| || || || |||||||| | | || | |||||| Sbjct 1879173 AGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCT 1879232 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | || || ||||| || Sbjct 1879233 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 1879292 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | |||| || ||| || ||||| || || || Sbjct 1879293 TGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTC 1879352 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 1879353 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || |||||||||||||||| | || | ||||| || | Sbjct 1879735 CAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAA 1879794 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| || | ||||||||| | | || || ||||| || || | Sbjct 1879795 GCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGA 1879854 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 1879855 TCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGC 1879914 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||||||||||| | |||||| Sbjct 1879915 CCGTGAGAGTCTTCACGAATATCTGCAT 1879942 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || || ||||| || || || || ||||||||||||| || || | || || || || Sbjct 1879457 AGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCTCGAGC 1879516 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || || || || || | ||||||||||| | || |||||||| || || || Sbjct 1879517 TGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATC 1879576 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || ||| | || | | |||| ||| || || || || || || || |||||| Sbjct 1879577 TTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCTTGCCC 1879636 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || |||| |||||| Sbjct 1879637 GTCAGGGTCTTGACAAAGATCTGCAT 1879662 Score = 84.2 bits (92), Expect = 5e-11 Identities = 143/206 (69%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || ||||| |||||||| || || |||||||| || | | ||| | || || || || Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || || || || || | ||||||||| | | || || ||||| ||||| || Sbjct 1879012 TGCTTACCAGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || ||||| | || | | | || ||| ||| || || || || || || ||||| Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||||| ||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818227700754