Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq98 199 8e-46 seq120 181 2e-40 seq1 109 1e-18 seq79 100 6e-16 seq13 96.9 7e-15 >seq98 Length=2497588 Score = 199 bits (220), Expect = 8e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| || ||||| | |||| || || |||||||| ||||| | Sbjct 2388711 ACCACCACGGAGGCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGA 2388652 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct 2388651 AAGGGTACGCCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGG 2388592 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| || || || | ||||| || || |||| || || Sbjct 2388591 AATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCAGAAGACTCCAC 2388532 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| |||||||| ||||| ||||| || ||||| Sbjct 2388531 CTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||| ||||| | || |||||||||||||| || || || || || ||| Sbjct 2387937 TCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 2387878 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||||||||| ||||| || ||||||||||||||||| || || ||| | Sbjct 2387877 ATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTCACGTTG 2387818 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || |||||||| | |||||||| || ||||||||||| ||||| | ||||| ||| Sbjct 2387817 TCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACG 2387758 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 2387757 AAGATCTGCATT 2387746 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || ||||| || || || || | ||| || || ||||||||||| || | Sbjct 2388483 ACCGCCGCGGAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 2388424 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || |||||||| || ||||| ||| || Sbjct 2388423 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGG 2388364 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || ||| | ||||||||||| || | ||||| Sbjct 2388363 GATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGAC 2388304 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | ||||| || || |||||||| Sbjct 2388303 CTCCAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2388256 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || ||||| || ||||| | |||| || || |||||||||||||| | Sbjct 2388254 CCTCCGCGGAGACGAAGAACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAT 2388195 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| | || || || || ||||| | |||||||| || ||| Sbjct 2388194 AGGGTGCGTCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGG 2388135 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| || || ||| | || || || ||||| | ||||| Sbjct 2388134 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACC 2388075 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| || || |||||||| Sbjct 2388074 TCCAAGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2388028 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| || || || | || || ||| Sbjct 2387572 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTATCGGAGGACTCCACCTCG 2387513 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| || || | |||||||||||| |||||||| Sbjct 2387512 AGGGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATCTGCAT 2387469 >seq120 Length=2004100 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | |||||| || || |||||||||||||| | Sbjct 1878647 ACCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1878706 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| ||||| || ||||| ||||||| ||| || ||||| ||| Sbjct 1878707 GAGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGG 1878766 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||||||||||||||| || ||| | ||||| ||||| |||| || || Sbjct 1878767 GATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAAC 1878826 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || || | ||||| || || || ||||| Sbjct 1878827 CTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCAT 1878874 Score = 178 bits (196), Expect = 3e-39 Identities = 154/191 (81%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | || |||||||||||||| || || || ||||||||| Sbjct 1879752 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 1879811 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || ||||| ||||| ||||||||||| |||||||| || || ||| | Sbjct 1879812 ATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1879871 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| || | ||||| ||||| ||||| ||||| ||||| | |||||| ||| Sbjct 1879872 TCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGAGTCTTCACG 1879931 Query 283089 AATATCTGCAT 283099 ||||||||||| Sbjct 1879932 AATATCTGCAT 1879942 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || || || || || ||||| || | Sbjct 1879157 ACCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGA 1879216 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||| || || || || ||||| ||||||| || || || || || Sbjct 1879217 AAGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGG 1879276 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || ||| | ||||| |||||||| | ||||| Sbjct 1879277 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGAC 1879336 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||||||||| | ||||| ||||| |||||||| Sbjct 1879337 CTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 152 bits (168), Expect = 1e-31 Identities = 149/191 (78%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | ||| ||||| || ||||| || || || || ||||| Sbjct 1878967 TCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA- 1879025 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| || || ||||| ||||| |||||||||||||||||||| || || ||| | Sbjct 1879026 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTG 1879085 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || ||||||| ||||| ||||| ||||||||||| || |||| ||||| ||| Sbjct 1879086 TCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACG 1879145 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 1879146 AAGATTTGCAT 1879156 >seq1 Length=2640167 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || |||||||| | | |||||| | ||||| ||||| ||||| || || ||| | Sbjct 596353 CTCATTGGCATGAACTCGAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGACCGTCTG 596294 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| ||||| || ||||||| || || ||| | | |||||||| | || ||||| Sbjct 596293 CTCGTCGCGCTCGGTGACGAGAAGGTCTACAACGCGACCAACCCCTTTGACTTCATGGAC 596234 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAG 230401 | || || |||||||| || || ||||||||||| ||||| || ||| || || ||| Sbjct 596233 ATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTACTCCAAG 596174 Query 230402 GC 230403 || Sbjct 596173 GC 596172 Score = 96.9 bits (106), Expect = 7e-15 Identities = 132/183 (72%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 ||| ||||| ||||| |||| ||| ||| | || || ||||| || || || ||||| | Sbjct 599525 TCTCATCGGTATGAACGCTGCTCTGATGCGCCAGTACATCGAGTTTGTCGCAGATCGGCT 599584 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 || || | ||||| ||||||| || ||| | | ||| || |||| || ||||| Sbjct 599585 CTTGGTCTCCCTAGGCAACGAGAAGCACTACAACGCGACGAATCCGTTCGACTTCATGGA 599644 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AA 230400 | || ||||||||||| || || ||||| ||||| ||||| || || ||||| || Sbjct 599645 CTTGATATCACTCCAGGGCAAGACAAACTTTTTCGAGAAGCGAGTGTCGGACTATCAGAA 599704 Query 230401 GGC 230403 ||| Sbjct 599705 GGC 599707 >seq79 Length=745021 Score = 100 bits (110), Expect = 6e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| ||||| |||| || || ||| Sbjct 401422 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCG 401481 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || ||||| ||||| ||||| | ||||| ||||| |||||||| ||| Sbjct 401482 AGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTC 401529 >seq13 Length=966363 Score = 96.9 bits (106), Expect = 7e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 |||||||| |||||||| || ||||||||||| ||||| | | ||| |||||| Sbjct 191803 GTGAAAATATACCTGGCCGAGGCGTGGTCCTTGCCGCCTTGATCGCGAGTACCGAACTGA 191744 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899 || | |||| ||| |||| |||||||| || |||| | | |||||||||| || ||| Sbjct 191743 CCGTTTGGCATGAGCAAGTTGATGTTGTTACTGCCGATGAAGTCCTGAGCCAAGTTGACG 191684 Query 273900 ATAGTC-CCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACC 273958 || ||| | | ||| | ||||| ||||| |||||| | || | || ||||| Sbjct 191683 ATTGTCATCATCAAGCTCT-GTTCGCCATGGTGGTAGGCGGCCTTCTCCGAAATGTAACC 191625 Query 273959 ACTGAACTGAGCAACCT 273975 || ||||||||||| Sbjct 191624 GACGAGCTGAGCAACCT 191608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736866425796