Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq120 159 2e-34 seq98 136 3e-27 >seq120 Length=2004100 Score = 159 bits (176), Expect = 2e-34 Identities = 164/212 (77%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||||||||||||||| ||||||||||| |||| ||| ||| |||| || Sbjct 1878665 CACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTC 1878724 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||||| ||||||||| || | || | |||||||| || Sbjct 1878725 GAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTG 1878784 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | ||| | || ||||||| || || ||||| | |||||||||| Sbjct 1878785 GATCTT-TGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTAATCGTCT 1878843 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| ||||| || |||||||||||| Sbjct 1878844 TGCCGGTGAGCGTCTTGACAAAGATTTGCATG 1878875 Score = 143 bits (158), Expect = 2e-29 Identities = 162/216 (75%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| || ||| |||||| |||||||||||||||| ||| ||| | || | Sbjct 1879732 CACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 1879791 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| ||||||||||| | ||||||||| |||| || | || ||||| ||| Sbjct 1879792 CAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCT 1879851 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | || ||||| | ||| || ||||| | || || |||| Sbjct 1879852 GGATCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCT 1879911 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 | |||||||| ||||||||||| || |||||| ||| Sbjct 1879912 TGCCCGTGAGAGTCTTCACGAATATCTGCATGCTGT 1879947 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| ||||| || ||| ||||| || ||||||||||||| | || |||| | Sbjct 1879452 CACCGAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCT 1879511 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || ||||| || | ||||||||| || | ||| | |||||||| ||| Sbjct 1879512 CGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCT 1879571 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | |||||||||| ||||| ||||| | ||| || |||| Sbjct 1879572 GGATCTTGGCCTTCACATTATCAATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTCT 1879631 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| || ||||| |||||| Sbjct 1879632 TGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1879663 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || || |||||||| | || ||| | || || Sbjct 1879176 ACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAAAGCGTGCGGCCATCTTCG 1879235 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| ||||||||||||| ||| | || ||||| ||| Sbjct 1879236 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGA 1879295 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | || || ||||| | || |||||||| Sbjct 1879296 ATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGACCTCAAGGGTGATCGTCTTA 1879355 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||| ||||| Sbjct 1879356 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 120 bits (132), Expect = 2e-22 Identities = 151/206 (73%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| || |||||| || |||||||| || | || ||| |||| |||||| Sbjct 1878952 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGC 1879011 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || ||||| |||| |||||||| |||| || | || ||||| || ||| Sbjct 1879012 TGCTTACCAGCAAA-ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 1879070 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | ||||| || | || || ||||| | ||| |||||||| || Sbjct 1879071 TTCGCCTTGACGTTGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCG 1879130 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||||||||||||||| Sbjct 1879131 GTCAGCGTCTTCACGAAGATTTGCAT 1879156 >seq98 Length=2497588 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| |||||||||||||| | || ||| |||| || Sbjct 2388464 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCGTCCTCG 2388405 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| ||||| ||||| | || | || ||||| ||| Sbjct 2388404 AGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGA 2388345 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| || || ||||||| |||||| ||||| Sbjct 2388344 ATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCCAGCGTAATGGTCTTG 2388285 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||| || ||||| |||||| Sbjct 2388284 CCGGTAAGGGTCTTGACAAAGATCTGCATG 2388255 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || |||||| |||||| |||||||| || || | || ||| | || || Sbjct 2388693 CACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAAAGGGTACGCCCATCCTC 2388634 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||||| ||||||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 2388633 AAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTG 2388574 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| || ||| | || || || | || |||||||||| || || ||| Sbjct 2388573 GATCTTCGCCTTGACATTGT--CGATCGTATCAGAAGACTCCACCTCCAGAGTGATGGTC 2388516 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | ||||||||||| |||||||| Sbjct 2388515 TTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| || |||||| |||||||| || |||| ||| ||| | || || ||| Sbjct 2387952 AGGTGAAGAGTAGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2387893 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || ||||| | || || || |||| || | |||||||| || ||| Sbjct 2387892 TGCTTGCCCGCGAAGATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 2387833 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||||| | | |||||||| | || || || || | || |||||||| ||| Sbjct 2387832 TTCGCCTTCACGTTGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCC 2387773 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| |||||||| ||||| Sbjct 2387772 GTGAGGGTCTTGACGAAGATCTGCAT 2387747 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||||||| |||||| ||||||||||| |||| || ||| |||| ||| Sbjct 2388236 ACGAGATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGTCCGTCCTCC 2388177 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || ||||| | || || ||||||| || | || ||||| ||| Sbjct 2388176 AACTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCTGGCGGGATGCCCTCCTTATCCTGG 2388117 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || || || | || || ||||||| || || ||||| Sbjct 2388116 ATCTTCGCCTTCACGTTGTCAATCGTATCCGACGACTCGACCTCCAAGGTGATGGTCTTG 2388057 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| || ||||| |||||| Sbjct 2388056 CCGGTAAGTGTCTTGACAAAGATCTGCATG 2388027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989636595358