Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq120 154 4e-32 seq98 140 8e-28 seq79 84.2 5e-11 >seq120 Length=2004100 Score = 154 bits (170), Expect = 4e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| |||||||| || || || |||||||||||||| || ||| ||| Sbjct 1879939 CAGATATTCGTGAAGACTCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGAC 1879880 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 1879879 ACTATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGACCAGCAG 1879820 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || ||||| | || || ||||||| ||| || Sbjct 1879819 CGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAACATC 1879760 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1879759 CAGAAGGAGTCCACCCTCCACCTTG 1879735 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||||||||| ||||| || || ||| Sbjct 1879381 CAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTCGAGTCGTCGGAC 1879322 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || ||||| || ||||| Sbjct 1879321 ACAATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGATCAGCAG 1879262 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||||||||| | || ||| | ||||| || | Sbjct 1879261 CGCCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACGCTTTCGGATTACAATATT 1879202 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 1879201 CAGAAGGAGTCTACCCTCCACCTTGT 1879176 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || ||||| ||||||||||| || || ||| Sbjct 1878871 CAAATCTTTGTCAAGACGCTCACCGGCAAGACGATTACCCTCGAGGTTGAGTCTTCCGAC 1878812 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || ||||| ||||| ||||| || |||||||| Sbjct 1878811 ACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAG 1878752 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || ||||| || || | || || |||| || ||| || Sbjct 1878751 CGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGGCGTACCCTCTCCGACTACAACATC 1878692 Query 178104 CAAAAAGA 178111 || || || Sbjct 1878691 CAGAAGGA 1878684 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || ||||| |||||||| ||| || ||| Sbjct 1879659 CAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAATCTTCCGAC 1879600 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| ||||| || |||||||||||||| Sbjct 1879599 ACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAGCAG 1879540 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || |||||||| || || | || | ||||||| ||| | Sbjct 1879539 CGTCTCATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACGTTGTCCGATTACAACATT 1879480 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || ||||| || || || || Sbjct 1879479 CAGAAGGAATCCACTCTCCACCT 1879457 >seq98 Length=2497588 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||||||||| || || || || ||| Sbjct 2387750 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAAGTCGAGTCATCGGAC 2387809 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||| || ||||| ||||| || || || ||||| ||| Sbjct 2387810 ACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAACAA 2387869 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| | ||||| |||| |||||| || Sbjct 2387870 CGCCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAACATC 2387929 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 2387930 CAGAAGGAGTCTACTCTTCACCTTG 2387954 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || ||||| || ||||| || |||||||| || || Sbjct 2388487 CAAATTTTCGTGAAGACGTTGACGGGAAAGACCATCACTCTGGAGGTGGAGTCTTCTGAT 2388546 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || || || || |||||||| Sbjct 2388547 ACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAG 2388606 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || || || ||||| | || ||| | || |||||| || Sbjct 2388607 CGGTTGATCTTTGCGGGGAAGCAACTTGAGGATGGGCGTACCCTTTCAGACTATAACATC 2388666 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 2388667 CAGAAGGAGTCCACGCTCCATCTCGT 2388692 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || || || ||||| || || ||| Sbjct 2388259 CAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTGGAGGTCGAGTCGTCCGAC 2388318 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || ||||| || || || || Sbjct 2388319 ACTATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCACCTGATCAACAG 2388378 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| || || | || || | ||||| ||| || Sbjct 2388379 CGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGATTACAACATC 2388438 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 2388439 CAGAAGGAGTCGACGCTCCACCTTGT 2388464 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||| |||||||||||||||||||| ||| || Sbjct 2387472 CAGATCTTCGTTAAGACTCTCACTGGAAAGACGATCACCCTCGAGGTGGAGTCCTCCGAT 2387531 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| ||||| || ||||| |||||||| || || Sbjct 2387532 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGG 2387572 >seq79 Length=745021 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||||||||||||||| || ||| Sbjct 401522 CAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCTGAC 401463 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| |||||||| || || Sbjct 401462 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 401422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728516431756