Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq120 163 3e-35 seq98 158 1e-33 seq46 113 4e-20 seq79 95.1 1e-14 >seq120 Length=2004100 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || ||||||||||||||||| ||||| ||||||||| Sbjct 1878648 CCACCACGGAGACGAAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1878707 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| |||| ||||| |||||||||||||| ||||| ||||| ||||| | || Sbjct 1878708 AGGGTACGCCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 1878767 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || | ||||| | ||| | | | |||||| ||||| || Sbjct 1878768 ATGCCTTCCTTGT-CTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAAC 1878826 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || || |||||||| || || || |||||| Sbjct 1878827 CTCGAGGGTAATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGCATG 1878875 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || |||||||||||| || || || || Sbjct 1879158 CCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCCGAA 1879217 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||||||||| ||||||||||| || || | ||| Sbjct 1879218 AGCGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGAGGA 1879277 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1879278 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCGATTGTGTCCGACGACTCGAC 1879336 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 1879337 CTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 1879384 Score = 136 bits (150), Expect = 4e-27 Identities = 164/219 (75%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| | || || ||| ||||||||| ||||| || |||||||||||||| | || | Sbjct 1879732 CACCAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 1879791 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | |||||||||||||| || || || ||||| ||||| | |||| || |||||||||| Sbjct 1879792 CAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCC- 1879850 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || | || || | ||| | | | |||||| ||||| ||||| | || || || Sbjct 1879851 TGGATCTTGGCCTTGACGTTGTCGATAGTGTCAGAGGACTCGACCTCGAGGGTGATGGTC 1879910 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869 || ||||| || ||||| ||||| ||||||||| | ||| Sbjct 1879911 TTGCCCGTGAGAGTCTTCACGAATATCTGCATGCTGTCG 1879949 Score = 125 bits (138), Expect = 7e-24 Identities = 146/193 (76%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||| || || ||||| |||| || |||||||| || || || Sbjct 1878966 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTCCTCCAGCTGCTTACCAGC-AA 1879024 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||||||||| ||||| | ||||| || |||||||| | || | || || | ||| Sbjct 1879025 AATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGT-CTTGGATCTTCGCCTTGACGT 1879083 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || || ||||| ||||| | ||| ||||| || || ||||||||||| | Sbjct 1879084 TGTCAATGGTATCCGAAGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTCA 1879143 Query 41850 CGAAAATCTGCAT 41862 |||| || ||||| Sbjct 1879144 CGAAGATTTGCAT 1879156 Score = 122 bits (134), Expect = 8e-23 Identities = 157/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| || || || ||| |||||||||||||| || ||||| | || || |||| | Sbjct 1879452 CACCGAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTACGGCCGTCCT 1879511 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 ||||||||||||| || || || || ||||| ||||||| |||| || ||||||||| Sbjct 1879512 CGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCT 1879571 Query 41772 TGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| | | | | |||||| || || ||||| | ||| || || Sbjct 1879572 GGATCTTGGCCTTCACATTATCA-ATGGTGTCGGAAGATTCGACCTCGAGCGTGATGGTC 1879630 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||||||| ||||| || || ||||||||| Sbjct 1879631 TTGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1879663 >seq98 Length=2497588 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || | || || || ||||| ||||||||| ||||| || || || Sbjct 2388482 CCGCCGCGGAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGAC 2388423 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| |||| ||||||||| || | || Sbjct 2388422 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGATCAGGTGGG 2388363 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||||| |||||| || Sbjct 2388362 ATGCCCTCCTTGTCC-TGAATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGAC 2388304 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || || || || ||||| || || ||||||||| Sbjct 2388303 CTCCAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCATG 2388255 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||||||||||||||| ||||| | || |||||||||||||| ||||| Sbjct 2387938 CTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 2387879 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || ||||| |||||||| | ||||| || |||||||| ||| || |||| ||| Sbjct 2387878 GATGAGGCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTC-ACGT 2387820 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||||| || || | || ||||| || ||||| || ||||| | Sbjct 2387819 TGTCAATGGTGTCCGATGACTCGACTTCAAGGGTGATCGTCTTGCCCGTGAGGGTCTTGA 2387760 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 2387759 CGAAGATCTGCAT 2387747 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| ||||| |||||| ||||||||| ||||||||||| || Sbjct 2388710 CCACCACGGAGGCGAAGCACGAGATGGAGCGTGGACTCCTTCTGGATGTTATAGTCTGAA 2388651 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| | || || || ||||| || || || |||| ||||| ||||| | |||| Sbjct 2388650 AGGGTACGCCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCGCTGCTGGTCTGGGGGA 2388591 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | || || ||||||| Sbjct 2388590 ATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCG--ATCGTATCAGAAGACTCCA 2388533 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || ||||||| |||||| |||||||| ||||| Sbjct 2388532 CCTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2388484 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || ||||| ||| ||||| ||||| |||||||| Sbjct 2387745 CCGCCACGAAGACGCAGAACGAGGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGAC 2387686 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| ||||||||||| || || || || |||||||| || || | ||| Sbjct 2387685 AGCGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGATCAGGGGG 2387627 >seq46 Length=919979 Score = 113 bits (124), Expect = 4e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||||||||||||||| ||||| ||| Sbjct 474151 CCACCACGCAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 474092 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 474091 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 474032 Query 41756 ACGCT 41760 | ||| Sbjct 474031 ATGCT 474027 >seq79 Length=745021 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| |||||| |||||||| | || ||| Sbjct 401245 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 401304 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCT 41760 ||||||||||||||||| ||||| || |||||||| | ||| | ||| Sbjct 401305 AGCTGCTTGCCGGCGAAGATCAGTCGTTGTTGGTCTGGGGGGATGCT 401351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302994488800