Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1814 113 1e-19 >seq1814 Length=443622 Score = 113 bits (124), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 230436 TCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 ||| ||||| ||||| |||||||| || | || ||| | || ||||| || ||||| | Sbjct 436169 TCCCTGTCGGACTTATCGGCATGAATGCCAAGCTCATGTGCCAATACATTGAGTTCGTCG 436228 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTG 230554 | ||||| | ||||||| |||||| || |||||| || | |||||||||| Sbjct 436229 CTGACCGTTTGCTTGTTGCTCTTGGTGCAACCAAGGTGTACGACGTCACCAACCCCTTTG 436288 Query 230555 CATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTG 230614 || ||||| | || ||||| || || ||||||||||||||||| ||||||||| | Sbjct 436289 ACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTCTCGG 436348 Query 230615 ACTA 230618 |||| Sbjct 436349 ACTA 436352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057783082375970