Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1814 156 4e-33 >seq1814 Length=443622 Score = 156 bits (172), Expect = 4e-33 Identities = 287/418 (69%), Gaps = 2/418 (0%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || || ||||| || || || | ||||||||| || |||||| Sbjct 435992 CCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTTC 435933 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || |||| ||||| || ||||| || || ||||||||||||| ||||| Sbjct 435932 TTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAAG 435873 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 |||| | || || | | | | ||||| | || |||||||||| || |||| || Sbjct 435872 GCGACGAGACGCTCAGAGAAGGACGCGTTCTCGTCCGAAATCCATTTCAGCGCCCAATCA 435813 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT 17224 || || ||| | |||| || || || ||||| | || | | || | || Sbjct 435812 GCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGAAGAGGTATTCACGCTGCTTC 435753 Query 17225 AGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATG 17284 | || | || ||||| |||||||| ||| ||| | |||||||| ||||||||||| Sbjct 435752 GGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATC 435693 Query 17285 GCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGT 17344 || || || || || || | || || || || ||| ||||| | |||||||| Sbjct 435692 ATGATTTGGAAGCCATAGAACGACCGCGCCTCGGCACATTGGACTTCAGAGGAGAATCGT 435633 Query 17345 TC-CGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401 || || || || ||||| ||||| ||||| ||| || || || |||| | |||| Sbjct 435632 TCAAGCAAG-TTCTCGTTAACGATACCGTCAGACGCAGCAAAGAAGGCCAGAACATGC 435576 Score = 122 bits (134), Expect = 9e-23 Identities = 277/414 (67%), Gaps = 2/414 (0%) Strand=Plus/Plus Query 16997 CTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAAT 17056 ||||| || ||||| || || || || || ||||| || || ||||| | ||||||| Sbjct 433737 CTGATGAGCTCGTTGGAGAAGGTTAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAAT 433796 Query 17057 ATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGT 17116 || | || || ||||||| |||||||| || ||||| | || ||||| | || || Sbjct 433797 ATTGACGCAAAACACCCAGAGAAGAATATGCCTTCGACTGCCGCGAACGCCACCAACCGC 433856 Query 17117 TCGGCGTACGTCGCGTCTTTGTTACGAA-TCCATTTCTGCACCCACTCGGCTTTTTGCTT 17175 ||| ||| | || | | |||| |||| | | |||| || ||||| | || Sbjct 433857 TCGCTAAACGATGAC-CTCTCGTCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTT 433915 Query 17176 TATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTAT 17235 ||| ||||| || || || |||| || | ||| | || ||| | || Sbjct 433916 GATGGCCGGAATCGTGTCGATAGCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGAT 433975 Query 17236 ATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAA 17295 || || || || |||| |||| |||||||||||||||||||||| | || || Sbjct 433976 GTAGGTGTCAATCAGTAACGAGTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAA 434035 Query 17296 TCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATT 17355 |||||||| ||||| ||||| || | || || || | |||| ||||| | || || Sbjct 434036 GCCGTAAAAACATCGAGCTTCGGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTT 434095 Query 17356 TTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAA 17409 ||| || || || ||||| ||||||||||| || | || || |||||| Sbjct 434096 TTCATTTACAATACCGTCTGAGGCGGCGAAAAAGGCTAGTACGTGTGAAATGAA 434149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517526069122920