Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1814 147 2e-30 >seq1814 Length=443622 Score = 147 bits (162), Expect = 2e-30 Identities = 370/559 (66%), Gaps = 5/559 (1%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 |||||| |||||| || | ||||| || | ||||| || |||||||| || ||||| Sbjct 433703 ACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAA 433762 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || ||||| || || ||||| | ||| ||||| | ||||| |||| || ||||| Sbjct 433763 ACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAAGAA 433822 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 ||| || || || | || || || | || || || ||| | | || | | || Sbjct 433823 TATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTAAACGATG-ACCTCTCGTCCG 433881 Query 16381 AA-TCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 || |||| | || |||| || ||||| | ||| || ||||| || || || Sbjct 433882 AAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAG 433941 Query 16440 TAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACA 16499 ||||||| | ||| | ||| || | || || || ||||||||||| |||| Sbjct 433942 TAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTAACGAGTACG 434001 Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559 |||| |||||||||||||| || | || || || || || |||||||| || || | Sbjct 434002 TTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTCGGCCA 434061 Query 16560 TTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619 || || || | | || ||||| | ||||| ||||| || |||||||| || | Sbjct 434062 CCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGAGGCGG 434121 Query 16620 CAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT---ATGCC 16676 | ||||| || | || ||| |||||| | |||| || | || | |||| Sbjct 434122 CGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTTTGTCGTGCC 434181 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 ||||| | || | | || |||| ||| || | |||||| || |||| | |||| Sbjct 434182 AATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCTCGGCCT 434241 Query 16737 TTTTATACATTTTCCAAAT 16755 |||| ||||||| ||| || Sbjct 434242 TTTTGTACATTTGCCAGAT 434260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511395100499080