Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1814 143 3e-29 >seq1814 Length=443622 Score = 143 bits (158), Expect = 3e-29 Identities = 376/565 (67%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 || ||| || || ||| ||| | || || || | ||| || | |||||||| || || Sbjct 433700 CATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGT 433759 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 | || ||||| || || ||||| || ||||||||||| |||||||| | ||||| || Sbjct 433760 TAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAA 433819 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG--GCGCT---G 24305 ||| || ||||| |||||||| || || | | | ||| ||| || | || | Sbjct 433820 GAATATGCCTTCGACTGCCGCGAACGCCACCAACC--GCTCGCTAAACGATGACCTCTCG 433877 Query 24306 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 || |||||| | ||||| || || |||||||| | || || || || ||| Sbjct 433878 TCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATA 433937 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 ||| |||| | || | | | | ||||| | || || ||||||| | || | Sbjct 433938 GCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGA 433996 Query 24426 -TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484 ||| |||| || || ||||| || || | ||| || ||||| ||||||| ||| || Sbjct 433997 GTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTC 434056 Query 24485 GGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 24544 || | ||| || || | | || ||||| | | |||||||| || || ||||| Sbjct 434057 GGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGA 434116 Query 24545 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT-- 24601 ||| || ||||| || | ||| ||| || || | |||| | | || ||||||| Sbjct 434117 GGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGT-TTAGTTTGT 434175 Query 24602 -ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 24660 | |||||| || || | || |||| ||| ||| | ||||| || || |||| Sbjct 434176 CGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCT 434235 Query 24661 CTGCCTTTTTATACATATTCCAGAT 24685 | |||||||| ||||| | |||||| Sbjct 434236 CGGCCTTTTTGTACATTTGCCAGAT 434260 Score = 118 bits (130), Expect = 1e-21 Identities = 290/439 (66%), Gaps = 7/439 (2%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| | |||||||| | ||||| | ||||| || || ||||| Sbjct 436013 CAAGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGA 435954 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || ||||| || || ||||| || || ||||| || |||||||| || || Sbjct 435953 CCGGGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAG 435894 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT--- 24311 || || || || ||||||||||| | || | ||| | | ||| || || Sbjct 435893 ATACCCTCGACGGCCGCAAAGGCGACGAGAC--GCTCAGAGAAGGACGCGTTCTCGTCCG 435836 Query 24312 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 24369 ||||| || | |||||||| |||||| | || || ||||| || ||||| || |||| Sbjct 435835 AAATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCAT 435776 Query 24370 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 24429 ||||| || | | || || || | || || || || | || || Sbjct 435775 CGAAGAGGTATTCACGCTGCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATG 435716 Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489 | || || || ||||| || || ||||| || || ||||| | | ||||||| | Sbjct 435715 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAGCCATAGAACGACCGCGCCTCGGCAC 435656 Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 || ||||| | |||||||| || || || || || || |||||| || | Sbjct 435655 ATTGGACTTCAGAGGAGAATCGTTCAAGCAAGTTCTCGTTAACGATACCGTCAGACGCAG 435596 Query 24550 CAAAAAACGCCAATACATG 24568 |||| || |||| ||||| Sbjct 435595 CAAAGAAGGCCAGAACATG 435577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593699194431120