Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq454 93.3 4e-14 >seq454 Length=96760 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | || || | || | |||||||||||| || ||||| || |||| Sbjct 79966 TTCCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCG 80025 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | |||| || || || ||||| ||| | || |||| |||||||| | Sbjct 80026 AGAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAG 80085 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||| || || | | ||| |||||| | ||| Sbjct 80086 GAATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGA 80145 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | || || ||||||||||| | || || || || |||||||| Sbjct 80146 CTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422243663368604