Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1814 293 2e-74 seq221 141 1e-28 seq2162 125 7e-24 seq454 116 4e-21 seq1947 91.5 2e-13 >seq1814 Length=443622 Score = 293 bits (324), Expect = 2e-74 Identities = 460/654 (70%), Gaps = 11/654 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||||||||| || |||||||| | ||||| ||||||| Sbjct 434260 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCTTTCTGGACGGCGGAGGAAATGGACCTA 434201 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 | | ||| || ||| | | | ||||| ||| ||||| ||||| Sbjct 434200 AGCCACGACCTCTCAGATTGGCACGACAAACTAAACGATGGCGAACGCCACTTCATTTCA 434141 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||||||||||||| ||||| || || || || || || ||||| || Sbjct 434140 CACGTACTAGCCTTTTTCGCCGCCTCAGACGGTATTGTAAATGAAAACCTCGTCGAACGG 434081 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| ||||||||||| || || || || |||||||| || || ||| Sbjct 434080 TTCTCCAATGAGGTCCAGGTGGCCGAAGCTCGATGTTTTTACGGCTTCCAAGTCATGATG 434021 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCG---CTCTTCG 116929 |||||| | ||||| |||| ||| ||| || || ||||| ||| | |||| Sbjct 434020 GAGAACATACACTCCGAAACGTACTCGTTACTGATTGACACCTACATCAAAGACTCTCAC 433961 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || | || | ||||| | || ||||| ||||| ||| | ||||| |||| || Sbjct 433960 CAGCGGGAGTAC---TTGTTTACTGCTATCGACACGATTCCGGCCATCAAAAAGAAAGCA 433904 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048 || ||||| ||||| ||||| | | | |||||| | | || ||||||| ||||||| Sbjct 433903 GACTGGGCACTGCGGTGGATTTCGGAC-GAGAGGTCATCGTTTAGCGAGCGGTTGGTGGC 433845 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 |||||||| ||||| ||| | ||||| || || |||| || | |||||||||||||| Sbjct 433844 GTTCGCGGCAGTCGAAGGCATATTCTTCTCTGGGTGTTTTGCGTCAATATTTTGGCTCAA 433785 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| ||||| |||||||| || | || ||| ||||||||||||| | || || || Sbjct 433784 GAAGCGCGGGCTCATGCCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATGAAGG 433725 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 |||| ||||||||| ||| |||| ||| ||||||| | |||| || | | Sbjct 433724 CATGCACACCGACTTTGCGTGTATGCTTTTCCGGCATTTGAAGAGAAGACCAAGTCCCGA 433665 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | || || || ||||||| || || |||||||||||| |||||||| Sbjct 433664 GGTTGTTCTTGAAATTATCACCGAAGCTGTTGCCATCGAGCAGGAGTTCCTCAC 433611 Score = 271 bits (300), Expect = 8e-68 Identities = 400/564 (71%), Gaps = 17/564 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||| |||||||||||||| | ||||||| |||||||| Sbjct 435457 ATCTGGCAAATGTACAAGAAGCACGAAGCGTCGTTCTGGACGGCCGAGGAGATGGACCTG 435516 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| ||||||| | ||| | || || || ||||| || ||| || | Sbjct 435517 TCAAAGGACCTTCACGACTGGAACAACCGCCTTAATGATAATGAGCGTCACTTCGTCTCG 435576 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || |||||||| || || || ||||| ||||| |||||||| || | || || Sbjct 435577 CATGTTCTGGCCTTCTTTGCTGCGTCTGACGGTATCGTTAACGAGAACTTGCTTGAACGA 435636 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || || ||||||||||||| ||||| ||||| || ||| ||| Sbjct 435637 TTCTCCTCTGAAGTCCAATGTGCCGAGGCGCGGTCGTTCTATGGCTTCCAAATCATGATG 435696 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | ||||| || | || || |||||||||||||||| | ||| Sbjct 435697 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACGTACAT------CAAGGAA 435750 Query 116933 GAGAAGCTCCGT------TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 ||||| ||| | || | ||||||||||| || || |||||||| |||| Sbjct 435751 CCGAAGCAGCGTGAATACCTCTTCGATGCCATCGAGACTATCCCTTGCGTCAAGAGGAAG 435810 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGC-AGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045 || || ||||||||| ||||| | | | ||| | || ||||| ||||| || || Sbjct 435811 GCTGATTGGGCGCTGAAATGGATTTCGGACGAGA-ACGCGTCCTTCTCTGAGCGTCTCGT 435869 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 ||||| |||||||||||||| |||| || || || |||||| | || || ||||| Sbjct 435870 CGCCTTTGCGGCCGTCGAGGGTATCTTTTTCTCTGGATCTTTCGCGTCGATCTTCTGGCT 435929 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||||||| || || |||||||| || || ||| ||||||||||| | | ||||| Sbjct 435930 GAAGAAACGTGGTCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATTAGCCGCGACGA 435989 Query 117166 GGGTCTGCATTGCGACTTTGCCTG 117189 ||| |||| ||||||||| || Sbjct 435990 GGGCATGCACACCGACTTTGCTTG 436013 >seq221 Length=41398 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||||||||| || |||||| | || ||||| || | Sbjct 37826 ATGCAGATTTTCGTCAAGACGCTCACGGGCAAGACTATCACCCTTGAGGTCGAGTCCTCT 37767 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| ||||||||||| | ||||| Sbjct 37766 GACACCATCGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCAA 37707 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| || || ||||| || || | ||||| ||| ||||| ||| Sbjct 37706 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACACTCTCTGACTATAAC 37647 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| || ||||||| Sbjct 37646 ATCCAGAAGGAGAGTACTTTGCATCT 37621 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || || || || | Sbjct 37270 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCT 37211 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| ||||| ||||| || || ||||||| Sbjct 37210 GACACCATTGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 37152 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||| |||| |||| |||||||| || ||||| Sbjct 37151 GCAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTTTCTGATTACAA 37092 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 37091 CATCCAGAAGGAGAGCACTCTTCACCTTGT 37062 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| | || || || || || Sbjct 37548 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTGGAGTCCTCC 37489 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| ||||| || || | ||||| Sbjct 37488 GACACCATCGACAACGTT-AAGGCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCA 37430 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| || || ||||| || || | || ||||| ||||| || Sbjct 37429 ACAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACCCTTTCTGACTATAA 37370 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| ||| || || || Sbjct 37369 CATCCAGAAGGAGAGCACTCTTCACCT 37343 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| ||||||||| | || ||||| || | Sbjct 38111 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 38052 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| ||||| ||||| || || | ||||| Sbjct 38051 GACACCATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCTCCCGACCAA 37992 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| ||||| || || || || | ||||| || ||| |||||| Sbjct 37991 CAGCGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTACAAC 37932 Query 40870 ATCCAGAAGGAG 40881 |||||||||||| Sbjct 37931 ATCCAGAAGGAG 37920 >seq2162 Length=51060 Score = 125 bits (138), Expect = 7e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAG 40770 |||||||| ||||||||||| |||| || || || | |||| | | | | ||||| Sbjct 4857 CTCACGGGTAAAACCATCACTCTCGAGGTTGAGTCCTCAGACACCATCGACAATGTCAAG 4798 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 | || || | ||||| || ||||| ||| | |||||||| || | |||| |||||| Sbjct 4797 GCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGT 4738 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||| |||| ||||||||||||||| |||||| |||| || Sbjct 4737 AAGCAGCTTGAGGATGGGCGCACTCTCAGCGACTACAACATCCAAAAGGAGTCCACCCTT 4678 Query 40891 CA 40892 || Sbjct 4677 CA 4676 >seq454 Length=96760 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || ||||| | || ||||| | | Sbjct 80194 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCT 80135 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || |||| ||||| || ||||| || | |||||| Sbjct 80134 GATACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 80075 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||||||||||| || ||||| || || || |||| || || ||| || |||||| Sbjct 80074 CAACGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTACAAC 80015 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 80014 ATCCAGAAGGAGTCCACTCTTCACCTCGT 79986 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || || || | || ||||| | | Sbjct 80701 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTCGTCT 80642 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| || || ||||| ||||| | || || Sbjct 80641 GACACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGATCAA 80582 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || |||||||| || || | ||||| || ||| ||||| Sbjct 80581 CAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTACAAT 80522 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 80521 ATCCAGAAGGAGTCCACCCTTCATCTTGT 80493 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || || || | || || ||| | || Sbjct 80473 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCC 80414 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || | || |||| || || |||||||| || | || ||| Sbjct 80413 GACACGATCGACAATGTGAAAGCGAAGATTCAGGATAAGGAGGGCATTCCACCAGATCAG 80354 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | ||||| || ||||||||| Sbjct 80353 CAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTACAAT 80294 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 || ||||||||| | || || || || Sbjct 80293 ATTCAGAAGGAGTCTACTCTTCACCT 80268 >seq1947 Length=41422 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 || ||| | ||||| ||||||||||||| || ||||||||| |||| || | ||||| Sbjct 35475 ATTCCCCCAGACCAACAACGACTCATCTTTGCCGGCAAACAGTTGGAGGATGGTCGCACT 35534 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||| ||||||||||||||| | || || || Sbjct 35535 CTCAGCGACTATAACATCCAGAAGGAGTCGACTCTTCA 35572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199756915440