Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq454 116 4e-21 seq221 102 9e-17 seq2162 91.5 2e-13 >seq454 Length=96760 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| || | ||| || || | || || ||||||||||||||||| Sbjct 80282 CTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAA 80341 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || |||||||| || | || | || |||||| ||| ||| | || | ||| | Sbjct 80342 GATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCC-TGAATCTTCGCTTTCACAT 80400 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||| |||||| || || | || || || |||||||| || ||||| | Sbjct 80401 TGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGA 80460 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 80461 CGAAGATCTGCAT 80473 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | ||| | || | || | ||| |||||| || || |||||||| | Sbjct 79967 TCCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 80026 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || || ||||| ||||| || |||||||| |||||||| | || Sbjct 80027 GAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGG 80086 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG---TTTGAGCGTCGCCACCGTGTCGCTCGATTC 43132 | || ||||||||| ||| | || | || | |||| | ||| || || || Sbjct 80087 AATGCCTTCCTTGTCC-TGAATCTTCGCCTTTACATTGTCG--ATCGTATCAGATGACTC 80143 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||| || ||||| || || ||||| || ||||||||||| Sbjct 80144 GACTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||||||||| | ||| || || | || || ||||| ||||||||||| Sbjct 80510 CTCCTTCTGGATATTGTAATCGGACAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAA 80569 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||| || |||| || | | |||||| ||| ||| | || | || | Sbjct 80570 GATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCC-TGAATCTTCGCCTTCACAT 80628 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || || | || || || |||||||| || ||||| | Sbjct 80629 TGTCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGA 80688 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 80689 CGAAGATCTGCAT 80701 >seq221 Length=41398 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || |||||||||| || || || |||| || | |||||| || Sbjct 37074 GTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCG 37133 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 ||||| || || ||||||||||| | || | | |||||||||| ||| | || | || Sbjct 37134 GCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TGAATCTTGGCCTT 37192 Query 43106 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 || | | | ||||| || ||||| || | |||||||| ||||| || | || Sbjct 37193 GACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTCAAGGT 37252 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || ||||| ||||| Sbjct 37253 CTTGACGAAGATCTGCAT 37270 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || || || |||| || || || | || || |||||||| || Sbjct 37352 GTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTTCCG 37411 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| ||||| || || ||||| | || | | |||||||| | || | || | | Sbjct 37412 GCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGT-CTTGGATCTTCGCCTT 37470 Query 43107 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 | ||| | | | |||||| || ||||| || | |||||||| || || || | || Sbjct 37471 AACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGTCAAGGT 37530 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || ||||| ||||| Sbjct 37531 CTTGACGAAGATCTGCAT 37548 >seq2162 Length=51060 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| ||||||||| || ||||| || ||||| ||| | Sbjct 4663 ACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCC 4722 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| ||||| || | ||||||||||| | || | || ||||| Sbjct 4723 ATCCTCAAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTT 4782 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 4783 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGAT 4842 Query 43148 GGTTTTGCCCGTTAG 43162 |||||| ||||| || Sbjct 4843 GGTTTTACCCGTGAG 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571796021033320