Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq454 118 7e-22 seq221 111 1e-19 >seq454 Length=96760 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || || ||||| | ||| || ||||| |||||||| || || Sbjct 79967 TCCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 80026 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| || | |||||||| || || ||||| || |||||||| || Sbjct 80027 GAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGG 80086 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||||| || | | |||| ||| | || ||||| Sbjct 80087 AATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGAC 80146 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || |||||||||||||| ||||| ||||| ||||| Sbjct 80147 TTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Score = 109 bits (120), Expect = 4e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | |||| || ||||| || ||||||||||||||| || | || || | | Sbjct 80268 AGGTGAAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGC 80327 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 ||||| || ||||| || || |||||||| || || | || |||||| || ||| Sbjct 80328 TGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATC 80387 Query 34304 TTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCC 34362 || ||||| | || | | |||| |||| |||||| || |||| || || || ||||| Sbjct 80388 -TTCGCTTTCACATTGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCC 80446 Query 34363 GGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||||||||| Sbjct 80447 CGTGAGGGTCTTGACGAAGATCTGCAT 80473 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||| ||||||||| || | || || | ||| || || ||||| Sbjct 80511 TCCTTCTGGATATTGTAATCGGACAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAAG 80570 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| || ||| || | | |||||| || ||||| ||| | || | Sbjct 80571 ATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTG 80630 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | ||| ||||| |||| || || || ||||| ||||| || || || Sbjct 80631 TCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGACG 80690 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 80691 AAGATCTGCAT 80701 >seq221 Length=41398 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | |||||| || ||||| |||||||| ||||| || ||| | || || | Sbjct 37906 AGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGT 37965 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| ||||| || | ||||| |||||| || | | ||||||||| ||| Sbjct 37966 TGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATC 38025 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | || | | || | || | || ||||| || | |||||||| |||||| Sbjct 38026 TTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCG 38085 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||||||||||||||| Sbjct 38086 GTCAAGGTCTTCACAAAGATCTGCAT 38111 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | ||| || || ||||| |||||||| || || Sbjct 37044 CCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAA 37103 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||||||||||||| ||||| || || ||||||||||| || Sbjct 37104 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 37163 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | || | || | || || || Sbjct 37164 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCACC 37223 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| | || || || ||||||||||| Sbjct 37224 TCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323060112868640