Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq616 129 1e-24 >seq616 Length=116746 Score = 129 bits (142), Expect = 1e-24 Identities = 238/341 (70%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||| | |||||| || || |||| || ||||| |||||||| | || | || || Sbjct 87319 CTTCGGTTTCAAGACCCTTGAGAGGTCATATCTTCTCAAAATCAACGGGCGCACCGCCGA 87260 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 | || ||||||||| | ||||| || || || || |||||| | ||| |||| Sbjct 87259 AAGACCACAGCACATGCTCATGCGTGTCGCGGTTGGTATTCACGGCGCAGACGTAGAC-- 87202 Query 248946 CGTGCTC--GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 |||||| ||||| ||| | ||| || |||| | || ||||| |||||||| Sbjct 87201 CGTGCTATTGAGACATACCACCTTATGTCAGAGCGCTTCTTCACCCATGCTTCACCGACG 87142 Query 249004 CTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG-CCATGCA 249062 || ||||| |||||||| ||| |||||||||||||||| ||||| || |||| | Sbjct 87141 CTGTTCAATGCCGGTACTCCTAACGCTCAGCTGAGCTCGTGC-TTCTTGGTGTGCATGAA 87083 Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCG--AAGATTTCTAAA 249120 || |||||| |||| ||||| || ||||| ||| || | || ||| | ||| |||| Sbjct 87082 GGATGACTCTATCGAGGGCATCTACGACAC-CTTGAAGA-ACTGCGCTATGATCAGTAAA 87025 Query 249121 TTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGC 249161 || ||||| |||||||| | | ||||||||||| Sbjct 87024 ACGGCTGGCGGGATCGGTCTGAACATTCATAACATCCGAGC 86984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073724865708992