Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq221 131 1e-25 seq454 111 1e-19 >seq221 Length=41398 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 |||||||| || || || ||||||||||| |||||||| ||| || ||| | || Sbjct 37900 ATACCAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCC 37959 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || ||||| ||||| ||||||||||||||||| | |||||||||||| Sbjct 37960 TCGAGTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCT 38019 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | |||| ||| ||||| | ||| || ||| Sbjct 38020 TGAATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 38079 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||| |||||||||||||| ||||| Sbjct 38080 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 38111 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||| || || |||| |||| |||| || Sbjct 37067 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTG 37126 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| ||||| | ||||||||||||| ||| || Sbjct 37127 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 37186 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| ||||||||| | || || |||||||| || Sbjct 37187 GGCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGT 37246 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 37247 CAAGGTCTTGACGAAGATCTGCAT 37270 Score = 105 bits (116), Expect = 5e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||| || |||| || ||||||||||| ||||| ||||| ||| |||| | || Sbjct 37615 ATACCGAGATGCAAAGTACTCTCCTTCTGGATGTTATAGTCAGAGAGTGTGCGACCATCC 37674 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||||||||| || | || |||||||| ||||| | ||||||||||| Sbjct 37675 TCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCT 37734 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || ||| ||| || | | | |||| ||| ||||| | ||| || ||| Sbjct 37735 TGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTC 37794 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| || ||||| || || || |||||| Sbjct 37795 TTGCCCGTGAGCGTCTTGACGAAAATCTGCATG 37827 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| ||||| ||||| || ||| | || || || || Sbjct 37345 GTGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTG 37404 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| || | || |||||||| ||||| | ||||||||||| || || Sbjct 37405 CTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTT 37464 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | | |||| ||||||||| | ||| || ||||| || || Sbjct 37465 CGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGT 37524 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 37525 CAAGGTCTTGACGAAGATCTGCAT 37548 >seq454 Length=96760 Score = 111 bits (122), Expect = 1e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || |||||||| |||||||| || ||||| ||| || ||| | || | Sbjct 79756 TACCAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCT 79815 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | ||||| || || || || ||||| |||||||| || ||||| | || ||||| || Sbjct 79816 CAAGTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTT 79875 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | | ||||| ||| ||||||| ||||| |||| Sbjct 79876 GAATCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCT 79935 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || ||||||||||| ||||| ||||| Sbjct 79936 TGCCAGTAAGAGTCTTCACGAAGATCTGCAT 79966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395060663578399