Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1814 156 4e-33 >seq1814 Length=443622 Score = 156 bits (172), Expect = 4e-33 Identities = 377/568 (66%), Gaps = 7/568 (1%) Strand=Plus/Plus Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 |||| | ||||||||| || || | ||| ||||| | ||| || || ||||| || Sbjct 433695 AAAAGCATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAG 433754 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || ||||| || ||||| | || || || || | ||||||||||| || || | || Sbjct 433755 AAGGTTAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCA 433814 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || |||||||| || || ||||| || ||||| | || || || | |||||||| | Sbjct 433815 GAGAAGAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTAAACGATGACCTC 433874 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 | || ||| ||||| ||||| || | ||| ||||| || || || || Sbjct 433875 TCGTCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCG 433934 Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTA 14492 |||||| |||| || | ||| || | ||| ||| ||||| || ||||| |||| Sbjct 433935 ATAGCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTG--ATGTAGGTGTCAATCAGTA 433992 Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552 | ||| |||| ||||||||||| ||||| | || || || |||||||||| || Sbjct 433993 ACGAGTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAG 434052 Query 14553 CTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612 |||| | | || ||||| | | || | |||| | | |||||||| || ||||| | Sbjct 434053 CTTCGGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGT 434112 Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTT 14672 | || || ||||| || | || || | ||| |||| | || ||| | | |||| Sbjct 434113 CTGAGGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTT 434172 Query 14673 T---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14729 | | |||||| | | || | || || | ||| || | ||||| ||| || Sbjct 434173 TGTCGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAG 434232 Query 14730 CAACAGCTTTTTTATACATTACCCATAT 14757 | | || ||||| |||||| ||| || Sbjct 434233 CCTCGGCCTTTTTGTACATTTGCCAGAT 434260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482327397482920