Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1824 116 5e-21 >seq1824 Length=21986 Score = 116 bits (128), Expect = 5e-21 Identities = 288/436 (66%), Gaps = 7/436 (2%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||||||| ||||| ||| ||||| | ||| || || ||||| || | ||||| Sbjct 14545 CAGGCGAAATCGGTGTGCAAACCTTCGTCACGACTGATGAACTCGTTGGAGAGCGTGAAC 14486 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || || | || || ||||| || | |||||| ||||||||||| || | ||| ||||| Sbjct 14485 CCAGGTAATAACCCTCGCTTCTTGATCCAAAAGATGGAAGCGAAGGAGCTGGAGAAGAAT 14426 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33758 || ||||| || |||| ||| |||| ||| | || | || | ||| | | | Sbjct 14425 ATACCTTCCACCGCAGAAAACGCAACAAGACGTTCGGGAAAA--GTTGCTTGCTTATTCG 14368 Query 33759 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816 ||||| | ||||| | |||||||| | ||||| || || | | ||||| | Sbjct 14367 CAATCCAGCGGAGGGCCCATTGTGCCTTCTTCTGCACACACGGAATGGAGTGAATGGCGT 14308 Query 33817 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876 |||| | || ||| || | || |||| || | | ||| |||| Sbjct 14307 TAAACAAATGCGACCTTTGCCCGGAGTCCTCTACGAAAGTCTCAAGTAGAAGGGCGTACA 14248 Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936 | |||||||| | ||| ||||| ||||| || || || ||||| || ||||||| | Sbjct 14247 TCTCCGAATGGACGTTCTCAATCATAATCTGGAACCCATAAAAACACCTGGCCTCGGGCA 14188 Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996 ||| ||||| || ||||| || | || ||||| || || ||||| || | Sbjct 14187 CCTGAACTTCGCTAGCGAATCGCTCCAACAGGTTCTCATTTACAATCCCATCGGATGCAG 14128 Query 33997 CAAAAAACGCCAATAC 34012 | || |||||||| || Sbjct 14127 CGAAGAACGCCAAAAC 14112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629793832258320