Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1814 143 4e-29 >seq1814 Length=443622 Score = 143 bits (158), Expect = 4e-29 Identities = 376/565 (67%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || ||| || || ||| ||| | || || || | ||| || | |||||||| || || Sbjct 433700 CATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGT 433759 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 | || ||||| || || ||||| || ||||||||||| |||||||| | ||||| || Sbjct 433760 TAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAA 433819 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG--GCACT---G 36328 ||| || ||||| |||||||| || || | | | ||| | ||| || | || | Sbjct 433820 GAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGC--TAAACGATGACCTCTCG 433877 Query 36329 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 || |||||| | ||||| || || |||||||| | || || || || ||| Sbjct 433878 TCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATA 433937 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 ||| |||| | || | | | | ||||| | || || ||||||| | || | Sbjct 433938 GCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGA 433996 Query 36449 -TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507 ||| |||| || || ||||| || || | ||| || ||||| ||||||| ||| || Sbjct 433997 GTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTC 434056 Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 || | ||| || || | | || ||||| | | |||||||| || || ||||| Sbjct 434057 GGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGA 434116 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TTTGGTGTTAGTTT-- 36624 ||| || ||||| || | ||| ||| || || | |||| | || ||||||| Sbjct 434117 GGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGT-TTAGTTTGT 434175 Query 36625 -ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | |||||| || || | || |||| ||| ||| | ||||| || || |||| Sbjct 434176 CGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCT 434235 Query 36684 CTGCCTTTTTATACATATTCCAGAT 36708 | |||||||| ||||| | |||||| Sbjct 434236 CGGCCTTTTTGTACATTTGCCAGAT 434260 Score = 123 bits (136), Expect = 3e-23 Identities = 291/437 (67%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| | |||||||| | ||||| | ||||| || || ||||| Sbjct 436013 CAAGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGA 435954 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || ||||| || || ||||| || || ||||| || |||||||| || || Sbjct 435953 CCGGGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAG 435894 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC--TCCATAACCGGCACT-GTCATGT 36334 || || || || ||||||||||| | || | ||| | || | || ||| Sbjct 435893 ATACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGACGCGTTCTCGTCCGAA 435834 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| || | |||||||| |||||| | || || ||||| || ||||| || |||| Sbjct 435833 ATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCG 435774 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 ||||| || | | || || || | || || || || | || || | Sbjct 435773 AAGAGGTATTCACGCTGCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGTC 435714 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || ||||| || || ||||| || || ||||| | | ||||||| | Sbjct 435713 TCGGAGTGGATGTTCTCCATCATGATTTGGAAGCCATAGAACGACCGCGCCTCGGCACAT 435654 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || ||||| | | |||||||| || || || || || || |||||| || ||| Sbjct 435653 TGGACTTCAGAGGAGAATCGTTCAAGCAAGTTCTCGTTAACGATACCGTCAGACGCAGCA 435594 Query 36575 AAAAACGCCAATACATG 36591 || || |||| ||||| Sbjct 435593 AAGAAGGCCAGAACATG 435577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658147962203960