Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq454 102 8e-17 seq221 87.8 2e-12 >seq454 Length=96760 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||||| || ||||| || || ||||| ||||| Sbjct 79968 CCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAG 80027 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | |||||| || || || |||||| |||| || |||||||| || ||||| Sbjct 80028 AGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGA 80087 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| | || | |||| | || | || || | | ||| || Sbjct 80088 ATGCCTTCCTTGTCC-TGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGAC 80146 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | |||||||||||| | || || ||||| |||||||| Sbjct 80147 TTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | |||| || ||||| || || || || |||||| Sbjct 80474 GCCGCCACGAAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGA 80533 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || || |||||||||||||| |||| ||||| || |||||||| || Sbjct 80534 CAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGG 80593 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || || || || || ||| | || | || | | || | ||||| | | ||| | Sbjct 80594 GATACCCTCCTTATC-CTGAATCTTCGCCTTCACATTGTCGATCGTGTCAGACGACTCGA 80652 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | ||||||||| || | || || ||||| || ||||| Sbjct 80653 CCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 80701 >seq221 Length=41398 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || || |||| |||||||| || || ||||| || || || ||| Sbjct 37394 TCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTG 37453 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| || ||||||||||| ||| | Sbjct 37454 TCTTGGATCTTCGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATG 37513 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || ||||| || || ||||| || |||||| Sbjct 37514 GTCTTACCAGTCAAGGTCTTGACGAAGATCTGCATA 37549 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| |||||| | |||| || ||||| || || ||||| | Sbjct 37920 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAA 37979 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 ||||| ||| || || |||||||| || || || ||||| ||| | || | || | Sbjct 37980 GATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCT-TGAATCTTAGCCTTGACAT 38038 Query 139693 T-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751 | || | ||||| | || ||| ||||||| ||| | |||||||||||||| || || | Sbjct 38039 TGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 38098 Query 139752 CGAATATTTGCATAGCT 139768 | || || |||||| || Sbjct 38099 CAAAGATCTGCATACCT 38115 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||||| || ||| || || ||||| ||||| Sbjct 37044 CCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAA 37103 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || | ||| || || || ||||||| || ||||| || ||||| Sbjct 37104 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 37163 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || || |||| | || |||||| Sbjct 37164 ATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCAC 37222 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || | |||||||||||||| || || ||||| || |||||| Sbjct 37223 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 37271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496045279784800