Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1814 145 1e-29 >seq1814 Length=443622 Score = 145 bits (160), Expect = 1e-29 Identities = 375/563 (67%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || ||| || || ||| ||||| || || || | ||| || || |||||||| || || Sbjct 433700 CATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGT 433759 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 | || ||||| || || ||||| || ||||||||||| |||||||| ||||||| || Sbjct 433760 TAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAA 433819 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC--TG-GCGCT-GT 50131 ||| || ||||| ||||| || || || || | | ||| | | ||| || | || || Sbjct 433820 GAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTA-AACGATGACCTCTCGT 433878 Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 50191 | |||||| | ||||| || || |||||||| | || ||||| || || | Sbjct 433879 CCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAG 433938 Query 50192 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA- 50250 || |||| | || | | | | ||||| | || || || |||| | || | Sbjct 433939 CAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGAG 433997 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 ||| |||| || || ||||| || || | || || ||||| ||||||| ||| ||| Sbjct 433998 TACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTCG 434057 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 | | ||| || || | | || ||||| | | |||||||| || || ||||| | Sbjct 434058 GCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGAG 434117 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTT---A 50427 || || ||||| || | ||| ||| || || || |||| ||||||| Sbjct 434118 GCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTTTGTCG 434177 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 | |||||| || || | || || | ||| ||| | ||||| || || ||||| Sbjct 434178 TGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCTCG 434237 Query 50488 GCCTTTTTATACATATTCCAGAT 50510 |||||||| ||||| | |||||| Sbjct 434238 GCCTTTTTGTACATTTGCCAGAT 434260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718241694331160