Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1814 170 2e-37 >seq1814 Length=443622 Score = 170 bits (188), Expect = 2e-37 Identities = 380/568 (67%), Gaps = 7/568 (1%) Strand=Plus/Plus Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 |||| | ||||||||| || || | ||| ||||| | ||| || || ||||| || Sbjct 433695 AAAAGCATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAG 433754 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || ||||| || ||||| | || || || || | ||||||||||| ||||| |||| Sbjct 433755 AAGGTTAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCA 433814 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || |||||||| || || ||||| || ||||| | || || || | |||||||| | Sbjct 433815 GAGAAGAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTAAACGATGACCTC 433874 Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102 | || ||| ||||| ||||| || | ||| ||||| || || || || Sbjct 433875 TCGTCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCG 433934 Query 14103 ATAGCATTAAATAAATATTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTA 14160 |||||| |||| || || ||| || | ||| ||| ||||| || ||||| |||| Sbjct 433935 ATAGCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTG--ATGTAGGTGTCAATCAGTA 433992 Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220 | ||| |||| ||||||||||| ||||| | || || || ||||| |||| || Sbjct 433993 ACGAGTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAG 434052 Query 14221 CTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14280 |||| | | || || || | | || | |||| | | |||||||| || ||||| | Sbjct 434053 CTTCGGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGT 434112 Query 14281 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT 14340 | || || ||||| || | || || | ||| |||| | || ||| ||| |||| Sbjct 434113 CTGAGGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTT 434172 Query 14341 T---TTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14397 | | |||||| || | || | || || | ||| || | ||||| ||| || Sbjct 434173 TGTCGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAG 434232 Query 14398 CGACAGCTTTTTTATACATTACCCATAT 14425 | | || ||||| |||||| ||| || Sbjct 434233 CCTCGGCCTTTTTGTACATTTGCCAGAT 434260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479709896264600