Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1814 147 2e-30 >seq1814 Length=443622 Score = 147 bits (162), Expect = 2e-30 Identities = 375/568 (66%), Gaps = 7/568 (1%) Strand=Plus/Plus Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 |||| | ||||||||| || || | ||| ||||| | ||| || || ||||| || Sbjct 433695 AAAAGCATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAG 433754 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || ||||| || ||||| | || || || || | ||||||||||| || || | || Sbjct 433755 AAGGTTAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCA 433814 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 || |||||||| || || ||||| || ||||| | | || || | |||||||| | Sbjct 433815 GAGAAGAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTAAACGATGACCTC 433874 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 | || || ||||| ||||| || | ||| ||||| || || || ||| Sbjct 433875 TCGTCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCG 433934 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTA 13948 || ||| | || || | ||| || | ||| ||| ||||| || ||||| |||| Sbjct 433935 ATAGCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTG--ATGTAGGTGTCAATCAGTA 433992 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 | ||| |||| ||||||||||| || || | || || || |||||||||| || Sbjct 433993 ACGAGTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAG 434052 Query 14009 CTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068 |||| | | || ||||| | | || | ||| | | ||||||||| |||||||| | Sbjct 434053 CTTCGGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGT 434112 Query 14069 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT 14128 | || || ||||| || | || || | ||| |||| | || ||| ||| |||| Sbjct 434113 CTGAGGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTT 434172 Query 14129 T---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14185 | | |||||| | | || | || || | ||| || | ||||| ||| || Sbjct 434173 TGTCGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAG 434232 Query 14186 CGACAGCTTTTTTATACATTACCCATAT 14213 | | || ||||| |||||| ||| || Sbjct 434233 CCTCGGCCTTTTTGTACATTTGCCAGAT 434260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478570739255160