Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq454 84.2 2e-11 seq221 82.4 6e-11 >seq454 Length=96760 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 42901 ACCAA-ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||| ||| | ||||| ||||| || | |||||||||||| | || || | || || Sbjct 79757 ACCAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTC 79816 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 | ||| ||||| ||||| ||||| ||||||||||| | || | ||||| || || Sbjct 79817 AAGTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTG 79876 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 ||| | || || || ||| ||||| | ||| || || | || || || || Sbjct 79877 AATCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTT 79936 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || || ||||| ||||| || || |||||| Sbjct 79937 GCCAGTAAGAGTCTTCACGAAGATCTGCATT 79967 >seq221 Length=41398 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| ||| |||||||| || | ||||||||||| | || || | || || | ||| Sbjct 37909 TGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGC 37968 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAAC 43026 ||||| || || ||||| |||||||| |||| || | ||| || || || ||| Sbjct 37969 TTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTA 38028 Query 43027 TCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTT 43086 | ||||| || | | ||||| | |||||| || | || || || || ||||| Sbjct 38029 GCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTC 38088 Query 43087 AGAGTTTTCACAAAAATTTGCAT 43109 | || |||||||| || ||||| Sbjct 38089 AAGGTCTTCACAAAGATCTGCAT 38111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381355567863102