Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1814 176 7e-39 seq1824 100 4e-16 >seq1814 Length=443622 Score = 176 bits (194), Expect = 7e-39 Identities = 383/562 (68%), Gaps = 16/562 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| |||| || || ||||||| || || | || || Sbjct 434260 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCTTTCTGGACGGCGGAGGAAATGGACCTA 434201 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 | | ||||| | |||||| | ||| | || || || || | || || || Sbjct 434200 AGCCACGACCTCTCAGATTGGCACGACAAACTAAAC-GATGGCGAACGCCACTTCATTTC 434142 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 ||| | | ||||| || |||| ||| || || || || || || || || || || || Sbjct 434141 ACACGTACTAGCCTTTTTCGCCGCCTCAGACGGTATTGTAAATGAAAACCTCGTCGA-AC 434083 Query 125197 GATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253 | ||||| | ||| | ||| | | || | ||| || |||||||| |||||| ||| Sbjct 434082 GGTTCTCCAATGAGGT--CCAGGTGGCCGAAGC-TCGATGTTTTTACGGCTTCCAAGTCA 434026 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA-- 125311 |||| |||||| | ||||| |||| |||||| ||||||||||| ||||| || Sbjct 434025 TGATGGAGAACATACACTCCGAAACGTACTCGTTACTGATTGACACCTACATCAAAGACT 433966 Query 125312 -TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 || || || | || || |||| || ||||||||| | ||| | || || | Sbjct 433965 CTCACCAGCGGGAGTACTTG---TTTACTGCTATCGACACGATTCCGGCCATCAAAAAGA 433909 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 | || | |||| | |||||||| ||||| | ||| |||| ||| | ||| Sbjct 433908 AAGCAGACTGGGCACTGCGGTGGATTTCGGACGAGAGGTCATCGTTTAGCGAGCGGTTGG 433849 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 |||| ||||| || || || ||||| ||||| || || |||||||| | || ||||||| Sbjct 433848 TGGCGTTCGCGGCAGTCGAAGGCATATTCTTCTCTGGGTGTTTTGCGTCAATATTTTGGC 433789 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 ||||||||||||| |||||||| || | || | |||||| | || ||| || | Sbjct 433788 TCAAGAAGCGCGGGCTCATGCCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATG 433729 Query 125551 AGGGCCTACACTGTGACTTTGC 125572 | ||| | ||| |||||||| Sbjct 433728 AAGGCATGCACACCGACTTTGC 433707 Score = 176 bits (194), Expect = 7e-39 Identities = 381/563 (68%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||| | || || || ||||||| ||| ||| | || ||| Sbjct 435457 ATCTGGCAAATGTACAAGAAGCACGAAGCGTCGTTCTGGACGGCCGAGGAGATGGACCTG 435516 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||||| |||| ||| | | || | | ||| | |||||| | || | ||| Sbjct 435517 TCAAAGGACCTTCACGACTGGAACAACCGCCTTAATGATAATGAGCGTCACTTCGTCTCG 435576 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 || || ||||||||||||| | || || || ||||| ||||| || || |||| ||| Sbjct 435577 CATGTTCTGGCCTTCTTTGCTGCGTCTGACGGTATCGTTAACGAGAACTTGCTTGA-ACG 435635 Query 125198 ATTCT-CTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||||| ||| ||| | | || |||| | || || || || ||||||||||||| Sbjct 435636 ATTCTCCTCTGAAGTCCAATGTGCC-GAGGCGCGGTCGTTCTATGGCTTCCAAATCATGA 435694 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | ||||| || | ||||| || || |||| |||||| || || Sbjct 435695 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACGTACATCAAGGAACCGA 435754 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGC----CGTCTATACGTAAA 125369 ||| ||| || || ||||| | || ||||| || | | |||| | | | Sbjct 435755 AGCAGCGTGAATAC---CTCTTCGATGCCATCGAGACTATCCCTTGCGTCAAGAGG---- 435807 Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 |||||| | |||| | | ||||| ||||| || | || | | | || | || Sbjct 435808 AAGGCTGATTGGGCGCTGAAATGGATTTCGGACGAGAACGCGTCCTTCTCTGAGCGTCTC 435867 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || || ||||| ||||| ||||| || || || ||| ||| | ||||| ||| Sbjct 435868 GTCGCCTTTGCGGCCGTCGAGGGTATCTTTTTCTCTGGATCTTTCGCGTCGATCTTCTGG 435927 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || ||||| || || || |||||||| || || | |||||| | || || ||| Sbjct 435928 CTGAAGAAACGTGGTCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATTAGCCGCGAC 435987 Query 125550 GAGGGCCTACACTGTGACTTTGC 125572 |||||| | ||| |||||||| Sbjct 435988 GAGGGCATGCACACCGACTTTGC 436010 >seq1824 Length=21986 Score = 100 bits (110), Expect = 4e-16 Identities = 337/511 (66%), Gaps = 14/511 (3%) Strand=Plus/Plus Query 125051 CTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCT-GTACGATTGGGAGACTCGTT 125109 ||||||||| || || ||| | |||||| |||||||| | || | | ||| || Sbjct 14021 CTTTTGGACTGTGGAGGAGATTGATCTGGCCAAGGACGTAGTGC-ACTGGCGCACAATGC 14079 Query 125110 TGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATG 125169 | || || | ||||| |||| | || | | ||||||| ||||| || | ||||||| Sbjct 14080 TCACCGATGCCGAGCGTTCGTTTTTCTCTCTCGTTTTGGCGTTCTTCGCTGCATCCGATG 14139 Query 125170 GAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTG 125228 | || || || || || |||||| |||||| || || ||| | | || |||| Sbjct 14140 GGATTGTAAATGAGAACCTGTTGGAGCGATTCGCTAGCGAAGTTCAGG-TGCCCGAGGCC 14198 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 ||| ||||| || ||||| || |||||||||||||| || ||||| |||||| | Sbjct 14199 AGGTGTTTTTATGGGTTCCAGATTATGATTGAGAACGTCCATTCGGAGATGTACGCCCTT 14258 Query 125289 CTGATTGACATGTACATTCGCGA-TCC--GCAACGTAAACACATGCTCTTTAACGCAATC 125345 || |||| | | | | || ||| |||| | | ||| | |||||||| || Sbjct 14259 CTACTTGAGACTTTCGTAGAGGACTCCGGGCAAAG--GTCGCAT-TTGTTTAACGCCATT 14315 Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT--CGATGACG 125403 || | | |||| | | | || ||||| ||||||| | || ||||| ||| | | Sbjct 14316 CACTCCATTCCGTGTGTGCAGAAGAAGGCACAATGGGCCCTCCGCTGGATTGCGAATAAG 14375 Query 125404 ACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT 125463 |||| | | | |||| | || || || || | || || || || || ||||| | Sbjct 14376 -CAAG-CAACTTTTCCCGAACGTCTTGTTGCGTTTTCTGCGGTGGAAGGTATATTCTTCT 14433 Query 125464 CGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGC 125523 | | || || ||||||||||| |||||||||| || | | || || | |||| Sbjct 14434 CCAGCTCCTTCGCTTCCATCTTTTGGATCAAGAAGCGAGGGTTATTACCTGGGTTCACGC 14493 Query 125524 ACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 | |||||||| || ||| ||||| || Sbjct 14494 TCTCCAACGAGTTCATCAGTCGTGACGAAGG 14524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741031234278440