Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq221 86.0 5e-12 seq2162 82.4 6e-11 >seq221 Length=41398 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 15173 TCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15232 || || || |||||||||||| ||| | | | || || | ||| ||||||||| | Sbjct 37921 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAG 37980 Query 15233 ATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATT 15292 |||||||| ||||||||| ||||| || || ||||| ||| || ||| ||| | Sbjct 37981 ATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTG 38040 Query 15293 TCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15352 || ||||| || || || || | ||| ||||| || || |||| || || ||| Sbjct 38041 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACA 38100 Query 15353 AAAATTTGCATA 15364 || || |||||| Sbjct 38101 AAGATCTGCATA 38112 >seq2162 Length=51060 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||||||||| || ||||| |||||||| ||||| ||| | | | | || || Sbjct 4670 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCCTCA 4729 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | ||||| || || ||||| ||||| ||||| ||||| Sbjct 4730 AGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 4789 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || ||||| || || || || | || ||||||||| Sbjct 4790 ATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGATGGTTTTA 4849 Query 15335 CCTGTCAG 15342 || || || Sbjct 4850 CCCGTGAG 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362165873955879