Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq221 114 1e-20 seq454 113 4e-20 seq2162 98.7 9e-16 >seq221 Length=41398 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 94794 GCAACA--CCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG 94850 |||||| ||||| || | |||| ||||| || | ||| |||||| | |||| | Sbjct 37895 GCAACATACCAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGC 37954 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| || || || || | ||||| || | || || || ||||||||||| || | Sbjct 37955 CATCCTCGAGTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCT 38014 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || |||||||| | ||| ||||||| | ||||| |||| |||| Sbjct 38015 TGTCTTGAATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGA 38074 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || | || ||||||||||||||||| Sbjct 38075 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 38111 Score = 111 bits (122), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCT 94862 ||||||||| ||||| || | |||||| || | ||||| || |||||| |||| Sbjct 37624 TGCAAAGTACTCTCCTTCTGGATGTTATAGTCAG--AGAGTGTGCGACCATCCTCGAGCT 37681 Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922 | |||||| | ||||| | | ||| || |||||||| || || || ||||| | || | Sbjct 37682 GCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCT 37741 Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982 |||||||||| | ||| ||||||| | ||||| |||| ||||| || || || | Sbjct 37742 TTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTCTTGCCCG 37801 Query 94983 TAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || || || || |||||||||| Sbjct 37802 TGAGCGTCTTGACGAAAATCTGCATGC 37828 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| |||||| | ||||| | | ||| || ||||||||||| || || || Sbjct 37393 ATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTT 37452 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| ||| | ||| ||||| | | || || |||| ||||| Sbjct 37453 GTCTTGGATCTTCGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGAT 37512 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| | || || || ||||||||||| Sbjct 37513 GGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 37548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || ||| | ||||| | | ||||| || ||||||||||| || ||| Sbjct 37116 TCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTG 37175 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||||| | | ||||||| | || || |||| |||||| Sbjct 37176 TCCTGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATG 37235 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || || ||||||||||| Sbjct 37236 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 >seq454 Length=96760 Score = 113 bits (124), Expect = 4e-20 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||||| | || | || | ||| | ||| || ||||| || | ||| ||||| Sbjct 79964 CATTCCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC 80023 Query 94837 GCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 | ||||| || || || || || || || ||||||| | || |||||| ||| Sbjct 80024 CG--AGAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCT 80081 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 |||||||| ||||| ||||| | ||| || ||||| || | ||| || |||| Sbjct 80082 GGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGAC 80141 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| |||| |||||| || || || || ||||| ||||| ||||| ||||||| Sbjct 80142 TCGACTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCATGC 80196 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| || || || || ||||||| || | || |||||||||||||| ||||| || Sbjct 79811 ATCCTCAAGTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTT 79870 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || ||||| || | | | ||||| | || || || | || || Sbjct 79871 ATCTTGAATCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAAT 79930 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||||||||| ||||| ||||||||||| Sbjct 79931 GGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 79966 >seq2162 Length=51060 Score = 98.7 bits (108), Expect = 9e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | || || |||||||| | ||| || ||||| | |||| |||||| Sbjct 4669 CACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCCTC 4728 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| || | ||||| ||||| ||||| ||||| ||||| | Sbjct 4729 AAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTG 4788 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || |||||||| | ||| ||||| | | || || || | ||||||||||| Sbjct 4789 GATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGATGGTTTT 4848 Query 94978 TCCAGTAAG 94986 || || || Sbjct 4849 ACCCGTGAG 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448274282610840